Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0058 ATGGATGTAAAAACAGGAGTGAGTGAGATTATTGGTCTGGATGGTACTCTTTCTTCAACTCAGTTTTTCCACACTGCTCTTTCATTTTTAGACAAGTGGAAAAGGTTCAATCTTTCTCTTCCTCCATGGATTTGGGTCCAATTTCCAAAACATCATTTCATATCTTCACATAATAATGTGGAAGGATACTTATCACTAGAGAACATATGCTTTAACAAATTCACTGAGGAAGAAGAGAGTAACAGAAGTTCGACATCGAAAGAAGAGAGCAACACCTCACATGGAGAAGAAGAGCTCTTTGATTATGCCACTTTAGTTCAGAGCAATTGCAATGAAGTAAACCACTATGATTTTCATATTGTATACAGTCCTTCATATAGAGTTCCAGTGCTGTATTTCCGCGCATACCATACCGATGGACAACCTTTATCGTTCAATGAAATTGAAAAGGACCTCCCTGGTCATTCTTCAAAGTTACTATCAGAATCCAAATGGACATTCATAACTAATGAGGAGCATCCATATTTGAATAGGCCATGGTACAAATTACATCCATGTGGGACAAGTGATTGGATGAAGCTGCTATTCCATGGTGATACATCTTTGAATAAAAATGGTTTTGGTATTGAACAATATCTAGTTTCATGGTTCTCAGTCATTGGACAAGTAGTTGGTCTCAAAATTCCTTTGGGGATGATGGATACAGTAGTTGCTAACCATTCTTAA 726 0.3719 MDVKTGVSEIIGLDGTLSSTQFFHTALSFLDKWKRFNLSLPPWIWVQFPKHHFISSHNNVEGYLSLENICFNKFTEEEESNRSSTSKEESNTSHGEEELFDYATLVQSNCNEVNHYDFHIVYSPSYRVPVLYFRAYHTDGQPLSFNEIEKDLPGHSSKLLSESKWTFITNEEHPYLNRPWYKLHPCGTSDWMKLLFHGDTSLNKNGFGIEQYLVSWFSVIGQVVGLKIPLGMMDTVVANHS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0058 241 Pfam Autophagocytosis associated protein, active-site domain 34 229 IPR007135 GO:0019787
Lan12g0058 241 Gene3D - 63 227 - -
Lan12g0058 241 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 13 232 IPR007135 GO:0019787
Lan12g0058 241 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 13 232 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0058 K17888 - gmx:100808589 335.495