Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0051 ATGGAATTGAGTTTTGATGAGAAAGATTATGCATCATGTTGTGGAAGTAGTAGATTTGCAAAAGAAATGGTTATAGCATCACCTTTTTCATCATTACAACATTCAATTTCAGTTGCAAGAAATATTTGGTTCAATAAGATTGATGTTAATTCTTGGCTTCAAGCTTTTTCTGCTCATCCTCAAATTGGTCAAACTCATTCTCCTTCAGTTGCTTCTCAAACCAGTGCTCAGTGGAGTAAGGGAGAACAATCAACTGCTTTAGCAACTGCTACTGGTTCTAGCTTACAGGAACTATCTGAATGGAATGCTCAGTATAGGAATAAGTTCGGGTTTGTATTTCTCATATGTGCATCTGGGAGAAGTACCGATGAGATACTCGCTGAACTGAAGAAACGTTATACAAACAGGCCGATTGTCGAATTTGAGATTGCAGCCCAGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAACTCTTTTCAAGTAAAGAAAGCATTTCTTCTACAACTAATAAGGACTCCATTGTTGTTGCTAAAAAGGCAGAAGAAGATCGTATAAGCATTATCGGCGGGCATGTGACTTCTGATTCAGCGAATTCGCCAGGAAAATCAATTCAGCTTCCCTCCAGAACCCGTCCACCCATTACAACTCATGTGTTAGATGTCTCGCGAGGTGCTCCAGCTGCTGGTATCGAGGTACTTTTGGAGGCATGGAGAGGCACACAGCCTCGTCCGACATTCGGGGTTGCAGATAGTGGCAGTTGGATAGTTCAAGGGTCTTCGACGACAGATTCAGATGGCCGAAGCGGCCAACTGCTGAGCATAGTTGACGATGTGAACCCGGGGATATACAGGATAAGTTTCAACACCGGAATGTACAATCCGAATGGCTTCTTTCCTTATGTGTCTATTGTGTTTGAAATCCTGGAGTCACAGAAAAAGCAACATTTCCATGTTCCACTGCTGCTTTCTCCATTTTCTTTCAGCACTTACCGCGGAAGCTAG 1005 0.4249 MELSFDEKDYASCCGSSRFAKEMVIASPFSSLQHSISVARNIWFNKIDVNSWLQAFSAHPQIGQTHSPSVASQTSAQWSKGEQSTALATATGSSLQELSEWNAQYRNKFGFVFLICASGRSTDEILAELKKRYTNRPIVEFEIAAQEQMKITELRLAKLFSSKESISSTTNKDSIVVAKKAEEDRISIIGGHVTSDSANSPGKSIQLPSRTRPPITTHVLDVSRGAPAAGIEVLLEAWRGTQPRPTFGVADSGSWIVQGSSTTDSDGRSGQLLSIVDDVNPGIYRISFNTGMYNPNGFFPYVSIVFEILESQKKQHFHVPLLLSPFSFSTYRGS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0051 334 Gene3D - 6 163 IPR036778 -
Lan12g0051 334 ProSitePatterns Transthyretin signature 2. 317 329 IPR023419 -
Lan12g0051 334 ProSitePatterns Transthyretin signature 1. 218 233 IPR023418 -
Lan12g0051 334 PRINTS Transthyretin signature 214 234 IPR000895 -
Lan12g0051 334 PRINTS Transthyretin signature 312 334 IPR000895 -
Lan12g0051 334 PANTHER URICASE AND TRANSTHYRETIN-RELATED 1 334 IPR023416 -
Lan12g0051 334 TIGRFAM hdxy_isourate: hydroxyisourate hydrolase 214 334 IPR014306 GO:0006144|GO:0033971
Lan12g0051 334 CDD TLP_HIUase 213 334 IPR014306 GO:0006144|GO:0033971
Lan12g0051 334 MobiDBLite consensus disorder prediction 192 211 - -
Lan12g0051 334 Gene3D Transthyretin/hydroxyisourate hydrolase domain 204 332 IPR036817 -
Lan12g0051 334 PANTHER 5-HYDROXYISOURATE HYDROLASE 1 334 - -
Lan12g0051 334 Pfam OHCU decarboxylase 11 157 IPR018020 -
Lan12g0051 334 SUPERFAMILY Transthyretin (synonym: prealbumin) 210 334 IPR036817 -
Lan12g0051 334 Pfam HIUase/Transthyretin family 215 333 IPR023416 -
Lan12g0051 334 SUPERFAMILY UraD-Like 12 161 IPR036778 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0051 K13484 - gmx:100788368 546.969