Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0049 ATGCTCAAAGTCATAACAAAGAAACAAAGAAAGAGAAACCATTTTCTATCACTTAACACTTCTTTAGCTTCAATGGAAGAGTATTACTATAAGAGGAAGCAAGTTCCAGCATTTGGGAGCTGGGATTGGAATGATAATCTACCATTCACACAATGCTTTGAATCTGAAGAACAAGGTGATCTTTATGTTACTGGTGACTTGTATGAGAATCATGTTGTTACACCAACCATGATCCTTGTTCCTAGTACAAAGGAAAAGGTTCATGACCAATATGAAAAAGAAGCTAAAAAGCAAAATTGGGTCAATAATGTGAAGAAACAACTTAGCCCAACTCATCACATTCCAAGACCAACACCAAAACCTGTGGATGAAGACTTATACAAGATCTCACCAGAACTTCTTTATGCAAAAACTAGAAAGAAGAGAGGGTTGTGTTTCTTTTCAAGTTGCTTGCTACCAACTTGTGTTGCATGA 474 0.365 MLKVITKKQRKRNHFLSLNTSLASMEEYYYKRKQVPAFGSWDWNDNLPFTQCFESEEQGDLYVTGDLYENHVVTPTMILVPSTKEKVHDQYEKEAKKQNWVNNVKKQLSPTHHIPRPTPKPVDEDLYKISPELLYAKTRKKRGLCFFSSCLLPTCVA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0049 157 PANTHER EXPRESSED PROTEIN 25 156 - -
Lan12g0049 157 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 25 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0049 Lan-Chr12 435216 437897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0049 - - gmx:100306260 208.764