Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0005 ATGAACTCATTCATGGCTGTTCGTGCCTTCAACCCTCGCTACTCCCTCTTATCTTCACCCCTCCGCCCCTCCTCCTTCCTCCACCACCGCCACACCATTCCCCGCTGCTTCCACTCCCTCCCGTTCCCTTCTCATACGCCGTTCTTCTCCGACTACGGTCGTCAAAGTCGCTCCGTTCATAGCCTCTTTGAGAGCGTCATGGAGGAGCTCCAGGCCATGCGCAAACGCAGGAAAACAGTTTCCAACGCTTCCAATTCCAAGTACCTTTATCTGAACATGGGATTGTTGAATGAAGAACTTGTGGAAGATAGGGTTGTCAACCATTCATTGCAAAAAGGGTTGCTTTTGGAGTTCAAGGGGGATTCTGATAGAATATTGTTAGCGGTTTCTCAAAGACCTGATGGCAAGAAGAAGTGGATGGTTTCTGATCAGAATGGTGTCACTTCTTCCATTAAGCCACAACAAGTAACCTACATTGTTCCTGGTATTCACAATTTTGACCCAGCAGATATCGCAGATTTTGCTCAGAAAGCTCAGGACAACATGGATTTGTCACTACTTGAATTTGCTTGGGCTGAGCTCCTTGAAAAGAATAAATCTGTGACAGTTGAAGAGTTAGCAGAGATGATTTTTGGCAGTGCTGAGCCTCTTGAGAGCTATTCTGCTCACGCGTTGCTGTCAAAAGATGAAGTATACTTCACTGTGCTTGAGACTAAAGGACCTTGTTCCATCTATGGACCTCGACCAAGTAAGCAGGTTGAGGAGCTTATTCTTAGGAAGCTTGCAAAGGAAGCTTATGAGAAAGAATTTCAGGAATTTATTGAATTGCTGTCATCTGCAAAATCAATGCCTTCACAAGATAAACCTCCTAAATCTTCCTGGATGGATGAGGAGAAAATTCGGAGTAGAATTGAGTCACTTGAAGCATATGCTATCGATGCATGTAAAAATGACGAACAAAGGAAAACAGCTGGGATGATACTTAAGGATATTGGGCTGGCAAAAACAGCATCTTCAGCTGTGAATCTCCTGGCAGATATTGGGTATTTTCCTGTACACGTCAATCTTGATTTGTTGAAGTTGGGTATTCCCACTGATCATTCAGAAGAAAACATATCAGTTGCTCAAAGTCTTCTATCAAACTCATATGATCAAGATGAGATCAATAGGAAGAATCTTACTGATTTAAAGGTTTATGCCATTGATGTTGATGAGGCTGATGAGCTTGATGATGCTCTGAGTGCAAAGAAGTTGCAAGATGGTCGAATTAAAGTTTGGATACATGTAGCAGACCCAACTAGATATGTTGAACCTGGGAGCATAGTGGACAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTACCCACTGCCACATATCCTATGTTTCCAGAAAAGCTTGCAATGAGGGGTATGAGTTTGCGACAAGGAGAGCTTTGCAATGCTGTTACTGTATCAGTTGTGCTGCATAATGATGGCAGCATTGCAGAATGTTCAGTGGTTAACTCAGTGATTAAACCAACATACATGCTGACATATGAGAGTGCATCTGAGCTACTGCATTTGAACCTGGAGGAGGAGGGCGAACTCAGAATTTTGTCTGAGGCTGCAAACCGTCGTTTAAATTGGCGCCGTCAACAGGGTGCTGTTGACACAGCAACATTAGATGCTCGCATTAAAGTGTCTAATGCCGAGAGTCGAGAGCCATCAATAAATATTTATGTGGAAAACCAGGCAGGCCCTGCAATGCGAATGGTCTCTGAAATGATGATACTGTGTGGCGAAGCCATGGCCACATTTGGGTCCCGTAATGACATTCCTTTACCCTACAGGGGACAGCCCCAATCATATATTAATGTTTCTGAATTTGCACACCTTCCAGAAGGGCCTGTTAGGAGCCATGCCCTGGTCAAAGTAATGCGTGCTGCACAAATTGATTTCAGGAAGCCAGTACGCCATGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACATCTCCCATCCGTAGATATTTGGATCTTCTTGCTCACTATCAGGTAAAGGCATTCCTTAGAGGTGAGCCTCCACCCTTTTCACCTGGTAAGCTTGAAGGGATAGCAGCAGTTGTAAATATGAAATTTAGAGCTGTGAGGAAGCTCTGCAGCAGTAGTCTTCGATACTGGATATTGGAATATTTACGAAGACAACCAAAAGAGAAAGTATATCGAGCATTGGTACTTAGATTTATTAAAGATCGAATTGCAGCTCTATTGTTGGTTGAGGTTGGATTTCAAGCTTCGACATGGGTTTCTGTTGGAACTCACATAGGGGATGAAATATTAGTTAAGGTGGAAGAAGCACATCCTCGTGATGATATTATTTTTCTGAAGGAGGTCATAAAAGGTTGA 2388 0.4343 MNSFMAVRAFNPRYSLLSSPLRPSSFLHHRHTIPRCFHSLPFPSHTPFFSDYGRQSRSVHSLFESVMEELQAMRKRRKTVSNASNSKYLYLNMGLLNEELVEDRVVNHSLQKGLLLEFKGDSDRILLAVSQRPDGKKKWMVSDQNGVTSSIKPQQVTYIVPGIHNFDPADIADFAQKAQDNMDLSLLEFAWAELLEKNKSVTVEELAEMIFGSAEPLESYSAHALLSKDEVYFTVLETKGPCSIYGPRPSKQVEELILRKLAKEAYEKEFQEFIELLSSAKSMPSQDKPPKSSWMDEEKIRSRIESLEAYAIDACKNDEQRKTAGMILKDIGLAKTASSAVNLLADIGYFPVHVNLDLLKLGIPTDHSEENISVAQSLLSNSYDQDEINRKNLTDLKVYAIDVDEADELDDALSAKKLQDGRIKVWIHVADPTRYVEPGSIVDREAMRRGTSVFLPTATYPMFPEKLAMRGMSLRQGELCNAVTVSVVLHNDGSIAECSVVNSVIKPTYMLTYESASELLHLNLEEEGELRILSEAANRRLNWRRQQGAVDTATLDARIKVSNAESREPSINIYVENQAGPAMRMVSEMMILCGEAMATFGSRNDIPLPYRGQPQSYINVSEFAHLPEGPVRSHALVKVMRAAQIDFRKPVRHGVLGIPGYVQFTSPIRRYLDLLAHYQVKAFLRGEPPPFSPGKLEGIAAVVNMKFRAVRKLCSSSLRYWILEYLRRQPKEKVYRALVLRFIKDRIAALLLVEVGFQASTWVSVGTHIGDEILVKVEEAHPRDDIIFLKEVIKG* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0005 795 Pfam RNB domain 390 685 IPR001900 GO:0003723|GO:0004540
Lan12g0005 795 PANTHER RIBONUCLEASE 54 792 - -
Lan12g0005 795 SUPERFAMILY Nucleic acid-binding proteins 340 729 IPR012340 -
Lan12g0005 795 PANTHER EXORIBONUCLEASE II, MITOCHONDRIAL 54 792 - -
Lan12g0005 795 SMART RNB_2 390 686 IPR001900 GO:0003723|GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0005 Lan-Chr12 40163 53965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0005 K01147 - gmx:100803243 1197.96