Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0004 ATGGCTACTGTAGATTCTTCACCTTCATCAGAGATACCTCTTAGCATCAGGGTCAACTCTAGAAGAAGCAACAACACTGTGCACCCATTTGAGATAACCTTAAACCAAACAAAAACAAGAACAAATGAATATAGGAAAGTGAAGAAGCATTACAAGAAATGGTTTCCTTGGTTGATACCATTCTTTGTTGTTGCTAATATCATTGTTTTTGTGATTACTATGTATGTTAATGATTGTCCTAAGAATTCTGTTTCATGCATTGCTCGTTTCCTTCATCGTTTCTCCTTTCAGCCTTTCAAAGAAAATCCACTCCTTGGGCCTTCTTCATTGACGTTACAGAAGATGGGGGCTCTTGATGTAAACAAAGTGATTCATAGACACCAGGGGTGGCGCCTCATCACTTGTATGTGGCTACATGGTGGGGTTTTCCATCTGCTGGCAAATATGTTGGGCATTCTAGTCATCGGAACTCGGCTTGAGAAAGAATTCGGGTTTGTGCTTGTTGGACTGCTATTTCTCATTTCTGGATTTGGGGGAAGTTTGCTTTCTGCTCTTTTCATTCAGTCAAACATCTCTGTTGGTGCTTCTGGTGCACTTTTCGGCTTGCTGGGAGGCATGCTTTCGGAACTTATTACTAACTGGTCAATATATGATAATAAGCTAGCAGCACTCTTCATCCTTGTCGTCATCATTGTTATCAATCTAGCAGTCGGGATTCTCCCGCACGTGGACAATTTTGCTCATATTGGAGGCTTTCTCACAGGATTTCTTCTTGGATTTGTGTTTTTCATACGGCCGCAGTTCGGATGGGTTAACCAACAATACGCTCCAGTCGAGTATTCTCCATCACAATCACAAGCCAAGCCAAAATTCAAGAAATATCAATGCATCTTGTTGGTCCTTTCCCTCATCATTGTAATTGTTGGGCTTTCTGTTGGCCTGGTTGCGCTTCTCCGCGGTGTGGATGCAAATGATCACTGCTCCTGGTGCCATTATCTGTCTTGTGTCCCAACTTCAAAATGGAGCTGCCATACTGAGGCTGCATATTGTTTGTCCAATGAGCTTGGGAACCAGCTGAACATAACATGCTCAAGCAATGGTAAATCAAATATATACTACATTCAAGATCCAACCAATTCTCAGATTCAGCAATTGTGTACTCAGCTTTGCGCTTGA 1176 0.4209 MATVDSSPSSEIPLSIRVNSRRSNNTVHPFEITLNQTKTRTNEYRKVKKHYKKWFPWLIPFFVVANIIVFVITMYVNDCPKNSVSCIARFLHRFSFQPFKENPLLGPSSLTLQKMGALDVNKVIHRHQGWRLITCMWLHGGVFHLLANMLGILVIGTRLEKEFGFVLVGLLFLISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLAALFILVVIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFFIRPQFGWVNQQYAPVEYSPSQSQAKPKFKKYQCILLVLSLIIVIVGLSVGLVALLRGVDANDHCSWCHYLSCVPTSKWSCHTEAAYCLSNELGNQLNITCSSNGKSNIYYIQDPTNSQIQQLCTQLCA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0004 391 PANTHER RHOMBOID-LIKE PROTEIN 4 19 390 - -
Lan12g0004 391 Gene3D - 48 265 IPR035952 -
Lan12g0004 391 SUPERFAMILY Rhomboid-like 54 267 IPR035952 -
Lan12g0004 391 Pfam Rhomboid family 124 265 IPR022764 GO:0004252|GO:0016021
Lan12g0004 391 PANTHER RHOMBOID-RELATED 19 390 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0004 Lan-Chr12 32233 38406 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0004 - - gmx:100801675 563.148