Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1437 ATGGCTCTGATATATATCTTTGCCATTTTATTCCTTATGGCTCCTTCAAGCAATGCCTCTTGGCCACCTTCACCAGGTTACTGGCCAAGTTCCAAATTCAGGTCTATGAACTTTTACAAAGGTTTTAGAAACCTTTGGGGTCCTCAGCACCAAAAACTAGACCAAAGTGCATTAACAATTTGGCTTGATAGAACCTCAGGTAGTGGCTTCAAGTCAGTTCGTCCATTTCGATCTGGTTACTTTGGTGCTTCTATTAAGCTCCATCCTGGTTATACTGCAGGAGTTATAACAGCTTTCTATCTTTCTAACAATGAAGCACATCCAGGCTTCCATGATGAAGTGGACATTGAGTTTCTAGGGACAACATTTGGAAAACCTTATACTTTGCAAACAAATGTTTATATAAGAGGAAGTGGAGATGGGAAAATTATTGGCAGAGAGATGAAGTTCCACCTATGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTCTGGAGTCCTAAGGAAATAATATTCCTTGTGGATGATGTGCCCATAAGGAGGTACCAAAGGAAGAGTGGTGCAACATTTCCACTAAGGCCAATGTGGCTTTATGGTTCAATATGGGATGCATCATCATGGGCAACTGAAGATGGAAAGTACAAAGCTGATTACAAATACCAACCTTTTGTTGCAAAATACACCAATTTCAAAGCAAGTGGTTGCTCAGCCTATGCTTCTCTTTGGTGCCATCCAGTGTCAGCATCTCCCTATAGGTCTGGTGGGTTGAGTAGACAACAATATAGGGCTATGAGATGGGTGCAAAGATATTACATGGTTTATAATTATTGCCAAGATAAAAAAAGAGACCATAGACTAACACCTGAGTGTTGGGGTTAA 885 0.4034 MALIYIFAILFLMAPSSNASWPPSPGYWPSSKFRSMNFYKGFRNLWGPQHQKLDQSALTIWLDRTSGSGFKSVRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYQRKSGATFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCSAYASLWCHPVSASPYRSGGLSRQQYRAMRWVQRYYMVYNYCQDKKRDHRLTPECWG* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1437 294 Pfam Glycosyl hydrolases family 16 40 221 IPR000757 GO:0004553|GO:0005975
Lan11g1437 294 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 254 292 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Lan11g1437 294 Gene3D - 18 292 - -
Lan11g1437 294 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 280 IPR013320 -
Lan11g1437 294 PIRSF EndGlu_transf 3 294 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lan11g1437 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 2 293 IPR044791 GO:0004553
Lan11g1437 294 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 2 293 - -
Lan11g1437 294 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 229 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1437 Lan-Chr11 23511647 23514116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1437 1 292 Glycoside Hydrolase AT3G44990 66.553 1.90e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1437 K08235 - gmx:100796698 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0226 19 2283981 2286975 Lan11g1437 11 23511647 23514116 PCT
Lan11g1437 11 23511647 23514116 Lan19g0226 19 2283981 2286975 PCT