Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1356 ATGAAGTGCCTAAACTCGGGGGAACGACTAGGAGGAGGAGTAGATGAAACGGTTCCTTCATCTGAATCTGTTGCAACCAAGGATTATTCAGCAAGTGGGCTTTCTTGCCTACCTGGACAAGTTAACAAGAAGCCGGACACTGGCAATATAGAAGAAGCTGAATCATCCCTACGTGAAAGCGGCGTCTTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGGTATGAATATCAGAAAGGAAATATAGTAGCTGCTTTACATGTCTTTGAGGGAATAGATATCGGTTCTGTGACTCCCAAGATAAAAAATTCCCTTTCTAGAAGTGGAGAGCGCCATAAGAGACATTCACAGAATCATGCAGAATCGCCGATGTCTAGACATGCTGTTGGCTTACTGTTGGAAGCAGTCTTTCTAAAAGCAAAATCTTTGCAGGTTCTTGAAAGGTTTAAAGAAGCTGCTCAGTCTTGCAAAGTTATTCTGGACATAGTGGAGTCTTCGTTGCCCAATGGCTTGCCTGATAACTTTGGTGCTGAATGCAAATTGCAGGAGACTATGAGTAAAGCAGTTGAGCTACTTCCTGAATTATGGAAACTTGCTGATTGTCCACGTGACGCTATTTTGTCTTACCGAAGAGCACTCCTTCGTCATTGGAATCTTGATGCAGAGACTATAGCAAAGATTCAAAAAGAATTTGTTGTTTTTCTTCTGTATAGTGGAGTGGAAGCAACACCCCCTAATCTCCGTTCCCAAATGGACGGATCATTTGTACCAACAAGCAATGTTGAAGAGGCTATACTTCTTTTAATGATCCTGCTAAGAAAAATCTCTCTAAAAAGAATCGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTGTTTCAGGAGATTTATCAGCTTTAGCCAAACAATTAGAAGAATTGCTCCCTGGGACTATCCATCGAAGAGAAAGGTGCCATTCTCTAGCTCTTTGCTATTATGTAGCAGGTAAGGACTTGGTTGCACTGGATCTTCTTAGAAAATTGTTGGGTAGTAGAGAAGACCCGAAACATGTTCCAGCATTGTTAATGGCCTCTAAGATTTGCTGTGAGGAATCTAGCCTTGCAGAAGAAGGGGTAAGCTTCGCTCGCAGAGCGCTTGAGAACTTGAATGGCAGATGTAATCAGTTAGAAAATCTTGCCAATTGCTTACTCGGTGTTTCGCTTTCAGCATACGCAAAATTGGCCACTTCTGATTCTGAGAGATGTGAGAGACAATCTGAGGCACTCCATGCCCTGGAAACTGCAGGCAGAAAGACCGAAATGAAAGACCCCGTTGTAGTGTACCATCTCAGTTTAGAGTATGCAGAGCAAAGGAAGTTGGATACTGCACTTTATCATGCAAAGTGCTTTTTAAAGCTGGAAGGAGGTTCTAATATTAAAGGGTGGTTATTGTTAGCCCGGATATTATCTGCTCAAAAACGTTTTTTGGATGCCGAATCTGTCATCAACGCTGCTTTGGATCAGACTGGTAAATGGGAACAAGGCAATTTGTTGCAGGCAAAAGCTAAACTTAGCATTGCACAGGGCCATTTAAAAAGTGCTATTGAAACATATACTCAGCTTCTTGCTGTTCTTCAAATTCAGAGTAAAAGTTTTGGTTCCGGAAAGAGGCTATATAAGGATAATAGAGATCTCACTAGGAACTTCGAAGTGGAAATATGGCATGATATTGCTTATGTCTACATCAGTCTTTCACAGTGGCATGATGCAGAGGTGTGTCTTTCAAAATCTAAGGCCATCAAGCCATTTTCTACTTCTAGATGTCACGCAACAGGCAAAATGTACGAAGCAAGGGGCCTTTACAAAGAAGCTCTAAAAGCTTTTCGTGATGCTTTGGACATTGATCCTAGTCATGTACTTAGTTTGATCTCCATTGCTGTAGTTCTGAGACGGTGCAGTAATCGATCAAATCCTGCTGTCAGAAGCTTTCTGATGGATGCACTACGGCACGACAGATTCAGTGCTTCGGCTTGGTATAATCTCGGACTTCTTCACAAGGACGAGGGTACAATATCATCATTAGTTGAAGCAGCTGAATGTTTTCAGGTAGCACATTTTCTTGAGGAATCTGCACCAGTTGAACCTTTCAGATGA 2142 0.4211 MKCLNSGERLGGGVDETVPSSESVATKDYSASGLSCLPGQVNKKPDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNIVAALHVFEGIDIGSVTPKIKNSLSRSGERHKRHSQNHAESPMSRHAVGLLLEAVFLKAKSLQVLERFKEAAQSCKVILDIVESSLPNGLPDNFGAECKLQETMSKAVELLPELWKLADCPRDAILSYRRALLRHWNLDAETIAKIQKEFVVFLLYSGVEATPPNLRSQMDGSFVPTSNVEEAILLLMILLRKISLKRIEWDPSILDHLSFALSVSGDLSALAKQLEELLPGTIHRRERCHSLALCYYVAGKDLVALDLLRKLLGSREDPKHVPALLMASKICCEESSLAEEGVSFARRALENLNGRCNQLENLANCLLGVSLSAYAKLATSDSERCERQSEALHALETAGRKTEMKDPVVVYHLSLEYAEQRKLDTALYHAKCFLKLEGGSNIKGWLLLARILSAQKRFLDAESVINAALDQTGKWEQGNLLQAKAKLSIAQGHLKSAIETYTQLLAVLQIQSKSFGSGKRLYKDNRDLTRNFEVEIWHDIAYVYISLSQWHDAEVCLSKSKAIKPFSTSRCHATGKMYEARGLYKEALKAFRDALDIDPSHVLSLISIAVVLRRCSNRSNPAVRSFLMDALRHDRFSASAWYNLGLLHKDEGTISSLVEAAECFQVAHFLEESAPVEPFR* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1356 713 MobiDBLite consensus disorder prediction 19 37 - -
Lan11g1356 713 Coils Coil 375 395 - -
Lan11g1356 713 PANTHER PROTEIN NPG1 1 713 IPR043376 -
Lan11g1356 713 Pfam Tetratricopeptide repeat 608 634 IPR019734 GO:0005515
Lan11g1356 713 Gene3D Tetratricopeptide repeat domain 101 545 IPR011990 GO:0005515
Lan11g1356 713 Gene3D Tetratricopeptide repeat domain 546 708 IPR011990 GO:0005515
Lan11g1356 713 SUPERFAMILY TPR-like 513 685 IPR011990 GO:0005515
Lan11g1356 713 PANTHER PROTEIN NPGR2 1 713 - -
Lan11g1356 713 SUPERFAMILY TPR-like 423 539 IPR011990 GO:0005515
Lan11g1356 713 MobiDBLite consensus disorder prediction 1 55 - -
Lan11g1356 713 MobiDBLite consensus disorder prediction 103 122 - -
Lan11g1356 713 SMART tpr_5 511 544 IPR019734 GO:0005515
Lan11g1356 713 SMART tpr_5 671 707 IPR019734 GO:0005515
Lan11g1356 713 SMART tpr_5 567 600 IPR019734 GO:0005515
Lan11g1356 713 SMART tpr_5 475 508 IPR019734 GO:0005515
Lan11g1356 713 SMART tpr_5 601 634 IPR019734 GO:0005515
Lan11g1356 713 SMART tpr_5 133 166 IPR019734 GO:0005515
Lan11g1356 713 ProSiteProfiles TPR repeat profile. 601 634 IPR019734 GO:0005515
Lan11g1356 713 SUPERFAMILY TPR-like 289 472 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1356 Lan-Chr11 20726801 20732903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g1356 1 713 Calmodulin-binding Proteins AT4G28600 59.917 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1356 K21843 - gmx:100800762 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1356 11 20726801 20732903 Lan9g0482 9 7183362 7188852 PCT