Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g1346 | ATGGATTCAATTCAAGAATTTATGGACTCAGACAACAGCAACACCTGCAACCTCACCAACAGTATCAACAATAACAACAACAACTTAGTTGGTAGTGGCTCTAACTCATTTGGTAGTTCTAATTCCCCATCTGGTTCTTCCACCAACACCAGCAGCCGCTATGAGAACCAGAAGCGCCGTGACTGGAACACCTTTGGCCAGTACCTCAAGAACCACCGTCCTCCTCTTTCCCTCTCCAGGTGTAGCGGTGCTCATGTTCTTGAATTTCTTCGGTACTTGGACCAATTTGGAAAGACCAAAGTCCACACTCCGATCTGTCCATTTTATGGCCATCCTAACCCTCCAGCGCCATGTCCATGCCCTCTTAGACAAGCCTGGGGTAGCCTTGACGCCCTTATCGGCCGTCTTCGTGCTGCTTTCGAAGAAAATGGAGGAAAGCCTGATACCAATCCATTTGGTGCACGAGCTGTGAGGCTCTACCTTCGTGAGGTTCGTGATTTGCAATCCAAAGCAAGAGGGATTAGTTATGAAAAGAAGAAGCGTAAACGCCCCTTACCACAACAACAACAACCACAATCAATGTCACTAGCATCTCCTTTTAATCATCACCACCAGCTTCCGCCACCTTCAGGTGCAACTCAATAA | 645 | 0.476 | MDSIQEFMDSDNSNTCNLTNSINNNNNNLVGSGSNSFGSSNSPSGSSTNTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPDTNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPLPQQQQPQSMSLASPFNHHHQLPPPSGATQ* | 215 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g1346 | 214 | Pfam | ALOG domain | 47 | 166 | IPR006936 | - | |
| Lan11g1346 | 214 | PANTHER | G1-LIKE PROTEIN | 1 | 212 | - | - | |
| Lan11g1346 | 214 | MobiDBLite | consensus disorder prediction | 27 | 57 | - | - | |
| Lan11g1346 | 214 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Lan11g1346 | 214 | MobiDBLite | consensus disorder prediction | 186 | 200 | - | - | |
| Lan11g1346 | 214 | ProSiteProfiles | ALOG domain profile. | 53 | 180 | IPR006936 | - | |
| Lan11g1346 | 214 | MobiDBLite | consensus disorder prediction | 27 | 53 | - | - | |
| Lan11g1346 | 214 | PANTHER | PROTEIN G1-LIKE2 | 1 | 212 | IPR040222 | - | |
| Lan11g1346 | 214 | MobiDBLite | consensus disorder prediction | 171 | 214 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan11g1346 | Lan-Chr11 | 20240766 | 20242466 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g1346 | - | - | gmx:100803605 | 286.189 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan11g1346 | 11 | 20240766 | 20242466 | Lan20g0989 | 20 | 10517270 | 10518975 | LSH | |
| Lan16g1277 | 16 | 20717173 | 20717703 | Lan11g1346 | 11 | 20240766 | 20242466 | PCT | |
| Lan11g1346 | 11 | 20240766 | 20242466 | Lan5g1240 | 5 | 26204485 | 26206393 | PCT |