Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0962 ATGGGTTTGGGGTCTAAGAGTAACCAACTTCTCTCCAAGATTGCAACCAATGACAAGCATGGGGAAAATTCTCCTTACTTTGATGGGTGGAAAGCTTATGATAAGAATCCATTCCACCCTTCAAAGAATCCTCAAGGTGTTATCCAAATGGGTCTTGCAGAGAATCAGCTCTGCTTTGATCTGATTGAAGAATGGATAAAGAATAATCCCAAGGCTTCCATTTGCACCCCTGAAGGAGTGCATAAGTTCAGAGACATTGCTAACTTTCAGGACTATCATGGGCTTCCAGAGTTCAGAACTGCTGTGGCAAATTTTATGTCTAAAGTAAGAGGTGGTAGGGTCAGATTTGATCCAAACCGTATAGTGATGAGTGGAGGGGCTACAGGTGCAAATGAACTAATAATGTTCTGCTTGGCTGATCCTGGAGATGCTTTTCTTGTTCCTACTCCTTACTATCCAGCATTCCTCCGTGATTTGTGTTGGAGAACTGGGTTGCAACTAATTCCTGTTCAATGTGATAGCTCCAACAATTTCAAGATAACAAGATCAGCTCTTGAAGAAGCTTACAATAAAGCCAAAGAGAACAACATCAATGTGAAGGGTTTGATCATAACAAACCCATCAAACCCTTTAGGAACAACCTTAGACAGAGACACATTGAAGAGCCTAGTAAGCTTCATCAATGAGAACAACATTCATCTAGTTTGTGATGAAATCTATGCAGCTACAGTGTTCAGTTCCCCTAGCTATGTTAGTGTCTCTGAAGTGATACAAGAAATGGAATCATGCAAAAAGGACCTCATTCACATTATATATAGTTTATCTAAGGACATGGGGTTCCCTGGTTTTAGGGTTGGTATAGTTTATTCATTCAATGATGTAGTTGTGAACTGTGGAAGGAAAATGTCAAGCTTTGGATTAGTCTCATCACAAACTCAACACATGCTTGCTTCAATGCTCTCAGATGATAGATTTGTTGATAAGTTTCTTGCTGAGAGTTCAAAAAGGCTAGCAAAGAGACATAACATATTCTCAAAAGTGCTTGAAGAGGTTAACATTACAAGGTTTCCAAGCAATGCAGGACTTTTCTGCTGGATGAACTTGAAGAGTTTGTTAAAGGAACAAACATTTGAAGCTGAAATGATGCTGTGGCATGTGATTATCAATGAGGTGAAGCTCAATGTTTCACCAGGATCTTCCTTCAGTTGTTCTGAGCCTGGTTGGTTTAGGGTTTGTTTTGCTAACATGGATGATGAAACAGTAGAAGTTGCATTGGGAAGAATCAGAACATTCGTTGGGAAAGAAACAAAGAAGCCTGCAATGCAAGTCAAAAGTTGGCAACGAAATCTCAGGCTCAGCTTCTCTTCAAGTAGAAGGTTTGATCATGAAACTGCTATGTCGCCTCATTCACCAATTCCTCAATCACCCCTTGTTAAAGCAACTTGA 1446 0.4004 MGLGSKSNQLLSKIATNDKHGENSPYFDGWKAYDKNPFHPSKNPQGVIQMGLAENQLCFDLIEEWIKNNPKASICTPEGVHKFRDIANFQDYHGLPEFRTAVANFMSKVRGGRVRFDPNRIVMSGGATGANELIMFCLADPGDAFLVPTPYYPAFLRDLCWRTGLQLIPVQCDSSNNFKITRSALEEAYNKAKENNINVKGLIITNPSNPLGTTLDRDTLKSLVSFINENNIHLVCDEIYAATVFSSPSYVSVSEVIQEMESCKKDLIHIIYSLSKDMGFPGFRVGIVYSFNDVVVNCGRKMSSFGLVSSQTQHMLASMLSDDRFVDKFLAESSKRLAKRHNIFSKVLEEVNITRFPSNAGLFCWMNLKSLLKEQTFEAEMMLWHVIINEVKLNVSPGSSFSCSEPGWFRVCFANMDDETVEVALGRIRTFVGKETKKPAMQVKSWQRNLRLSFSSSRRFDHETAMSPHSPIPQSPLVKAT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0962 481 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 273 286 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lan11g0962 481 MobiDBLite consensus disorder prediction 461 481 - -
Lan11g0962 481 Gene3D Aspartate Aminotransferase, domain 1 36 427 IPR015422 GO:0003824
Lan11g0962 481 Gene3D - 70 322 IPR015421 GO:0003824
Lan11g0962 481 CDD AAT_like 88 429 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 50 76 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 83 99 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 120 140 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 163 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 196 220 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 232 255 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 267 291 - -
Lan11g0962 481 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 299 322 - -
Lan11g0962 481 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 449 - -
Lan11g0962 481 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 6 449 - -
Lan11g0962 481 Pfam Aminotransferase class I and II 48 428 IPR004839 GO:0009058|GO:0030170
Lan11g0962 481 SUPERFAMILY PLP-dependent transferases 16 433 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0962 Lan-Chr11 9923024 9927875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0962 K20772 - gmx:100813347 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0962 11 9923024 9927875 Lan11g0962 11 9923024 9927875 ECH
Lan11g0962 11 9923024 9927875 Lan9g0720 9 11224298 11229507 LSH