Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0924 CATAAACCTTTTGAATTTCTTTGTTGTAGATATGCTGTTGTTACAGGAGGAAATAAGGGCATAGGCTTATCCACATGCAAGCTACTAGCCTCTAATGGGGTCACAGTGGTGCTAACAGCTAGAGACCATAAAAGGGGTCTTGAAGCTGTTGAAAAATTGAACGAACTTGGTCTCAAAGACCATGTGGTTTTTCATCACCTTGATGTAACAGATCCTGCTACTATTCCACCCCTTGTAGATTTCATCACAGCACAATTTGGAAAACTTGATATATTGGTAAATAATGCAGGGATTAGTTCAATAGTGGTAGATGATGTTGCTTTAGCTGCTTCAGGTCTTGAGGAAAAAGGTCCTCGTGGTTTTGATTGGAGTAAAATATTAAAAGATGACCAATCAGCTGAACCAGCTATTAAAACAAATTACTATGGACCCAAAGAAATATCCGAAGCACTTATCCCTCTTCTTCAACTCTCAGACTCTCCAAGAATTGTTAATGTTTCTGCTACTATGGGAGGCTTGGAGTTTATACCAGATGGAAGGGCTAAAGAAGTACTCAGTGATATTGAAAGCCTCACAACAGAAAAGATAAATGACATTGTGAATCAGTTTCTCGAAGATTATAAAGAGGGTTCATTGAAAACCAACGGTTGGCCTACTCATCTATCTGCATATACTGTCTCAAAAGCAGCATTGAATGCTTACACAAGAATCTTAGCAAAAAAGTATCCATCTTTCTGTGTTAATGCTCTTTGCCCTGGCCATGTGAAATCAGATTTTAGCCATAATACTGGGAATTTCACTATAGATGAAGGTGCTGAATGTGTTGTGAGGCTTGCTTTGTTACCTAATGGTGGTTCCTCTGGTCTCTTCTTCCATAGAAGTGAGGTTAGGCCATTTTGA 900 0.39 HKPFEFLCCRYAVVTGGNKGIGLSTCKLLASNGVTVVLTARDHKRGLEAVEKLNELGLKDHVVFHHLDVTDPATIPPLVDFITAQFGKLDILVNNAGISSIVVDDVALAASGLEEKGPRGFDWSKILKDDQSAEPAIKTNYYGPKEISEALIPLLQLSDSPRIVNVSATMGGLEFIPDGRAKEVLSDIESLTTEKINDIVNQFLEDYKEGSLKTNGWPTHLSAYTVSKAALNAYTRILAKKYPSFCVNALCPGHVKSDFSHNTGNFTIDEGAECVVRLALLPNGGSSGLFFHRSEVRPF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0924 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 285 IPR036291 -
Lan11g0924 299 Gene3D - 7 299 - -
Lan11g0924 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 9 299 - -
Lan11g0924 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 IPR002347 -
Lan11g0924 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Lan11g0924 299 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Lan11g0924 299 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 9 299 - -
Lan11g0924 299 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 211 239 IPR020904 GO:0016491
Lan11g0924 299 Pfam short chain dehydrogenase 11 172 IPR002347 -
Lan11g0924 299 PRINTS Glucose/ribitol dehydrogenase family signature 11 28 IPR002347 -
Lan11g0924 299 PRINTS Glucose/ribitol dehydrogenase family signature 87 98 IPR002347 -
Lan11g0924 299 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Lan11g0924 299 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Lan11g0924 299 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0924 Lan-Chr11 9399050 9421620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0924 2 181 Acyl Lipid Metabolism Gene Families AT3G55290 28.877 1.30e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0924 K15095 - gmx:100803877 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0924 11 9399050 9421620 Lan11g0924 11 9399050 9421620 ECH