Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0923 ATGGCAGAATCAACAAAAAGATATGCTGTTGTTACAGGAGGAAATAAGGGCATAGGCTTATCCACATGCAAGCTACTAGCCTCTAATGGGGTCACAGTGGTGCTAACAGCTAGAGACCATAAAAGGGGTCTTGAAGCTGTTCAAAAATTGAACGAACTTGGTCTCAAAGACCATGTGGTTTTTCATCACCTTGATGTAACAGATCCTGCTACTATTCCACCCCTTGTAGATTTCATCACTGCACAATTTGGAAAACTTGATATATTGGTAAATAATGCAGGGATTAGTTCAATAGTGGTAGATGATGTTGCTTTAGCTGCTTCAGATCTTGAGGAAAAAGGTCCTCATGGTTTTGATTGGAGTAACATACTAAAGGAAGATGACCAAACAGTTGAACCAACTATTAAAACAAACTACTATGGACCCAAAGAAATATCTGAAGCACTTATCCCTCTTCTTCAACTCTCAGACTCTCCAAGAATTGTTAATGTTTCTGCCATCGTGGGATGCTTAGAGTTTATACCAGATGGAAGGGCTAAAGAAGTTCTCAGTGATATTGAAAGCCTCACAACAGAAAAGATAAATGACATTGTGAATCAGTTTCTCGAAGATTATAAAGAGGGTTCCTTGAAAACCAAAGGTTGGCCTACCCATCTATCTGCATATACTGTCTCAAAAGCAGCATTGAATGCTTACACAAGAATCTTAGCAAAAAAGTATCCATCTTTCTGTGTTAATGCTCTTTGCCCTGGCCATGTGAAATCAGATCTTAGCCACAATACTGGGAATTTCACTCCAGATGAAGGTGCCGAATGTGTTGTGAGGCTTGCTTTGTTACCTAATGGTAGTTCTTCAGGTCTCTTCTTCAATAGAAGTGAAGTTACGCCATTTTGA 894 0.3937 MAESTKRYAVVTGGNKGIGLSTCKLLASNGVTVVLTARDHKRGLEAVQKLNELGLKDHVVFHHLDVTDPATIPPLVDFITAQFGKLDILVNNAGISSIVVDDVALAASDLEEKGPHGFDWSNILKEDDQTVEPTIKTNYYGPKEISEALIPLLQLSDSPRIVNVSAIVGCLEFIPDGRAKEVLSDIESLTTEKINDIVNQFLEDYKEGSLKTKGWPTHLSAYTVSKAALNAYTRILAKKYPSFCVNALCPGHVKSDLSHNTGNFTPDEGAECVVRLALLPNGSSSGLFFNRSEVTPF* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0923 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 1 297 - -
Lan11g0923 297 Pfam short chain dehydrogenase 8 169 IPR002347 -
Lan11g0923 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 284 IPR036291 -
Lan11g0923 297 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 209 237 IPR020904 GO:0016491
Lan11g0923 297 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 297 - -
Lan11g0923 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Lan11g0923 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 167 IPR002347 -
Lan11g0923 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
Lan11g0923 297 Gene3D - 2 297 - -
Lan11g0923 297 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Lan11g0923 297 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Lan11g0923 297 PRINTS Glucose/ribitol dehydrogenase family signature 153 169 IPR002347 -
Lan11g0923 297 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Lan11g0923 297 PRINTS Glucose/ribitol dehydrogenase family signature 241 258 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0923 Lan-Chr11 9383404 9421687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0923 3 179 Acyl Lipid Metabolism Gene Families AT3G55290 30.978 8.51e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0923 K15095 - gmx:100803877 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0923 11 9383404 9421687 Lan11g0923 11 9383404 9421687 ECH