LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g0916	ATGGCTACTTGTTCTTCTCGTTCACTGTGTGCTTCTTCATTCACTTCAATTTCGAGACCTTCTTATCAACCGCAATTTATCCCCTTCAACCTTCCTCATCGAACCGGTACGTCCCGGTTCAAATGCTCAGCCGGTCAGACCGGGTTCTTTACCAAACTAGGCCGGTTGTTAAAGGAAAAAGCGAAGAGCGACGTGGAGAAAATCTTCTCCGGTTTCTCCAAAACCCGAAACAACCTCGCCGTAATCGATGAACTTCTCCTTTATTGGAACCTCTCTGACACGGACCGAGTCCTTGATCAACTCGAAGAGGCTCTTTTAGTGTCTGATTTTGGGCCAAAAATTACTATTAAGATTGTTGATAACTTGAGGGAGGATATATTGTCAGGGAAGCTTAAATCAGGGAATGAGATTAAGGAAGCATTGAAACGGAATGTTTTGGAGTTATTAACCAGCAAGGGGAGTAAAACTGAACTTCAACTTGGATTCAGGAAGCCAGCTGTAATAATGATAGTTGGTGTTAATGGCGGTGGGAAAACAACATCTCTGGGAAAGCTGGCCTATAGATTGAAGAATGGAGGAGCTAAGATACTGATGGCAGCTGGTGATACATTTCGAGCAGCTGCCAGTGATCAGCTGGAAATATGGGCTGAGAGGACTGGGTGTGAGATTGTTGTGGCTGAATCTGAGAAAGCAAAAGCATCGTCAGTGCTTGTACAGGCTGTAAAAAAAGGAAAAGAGCTAGGATTTGATATTGTTTTGTGTGATACATCTGGACGTTTACACACTAATTACAGTCTAATGGAAGAGCTAATTTCTTGTAAAAAAGCTGTTGGGAAAGTAGTTTCTGGTGCACCTAATGAGATCCTCCTGGTTCTGGATGGAACTACTGGTTTGAATATGTTGCCACAAGCAAGAGAGTTCAACGAAGTAGTTGGTGTTACTGGTTTAATTTTGACAAAGCTGGACGGTTCTGCTAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTGGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGAAGCCTTTGTGGATGCCATTTTTGCCTAA	1104	0.4348	MATCSSRSLCASSFTSISRPSYQPQFIPFNLPHRTGTSRFKCSAGQTGFFTKLGRLLKEKAKSDVEKIFSGFSKTRNNLAVIDELLLYWNLSDTDRVLDQLEEALLVSDFGPKITIKIVDNLREDILSGKLKSGNEIKEALKRNVLELLTSKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNGGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASSVLVQAVKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKKAVGKVVSGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVDAIFA*	368

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan11g0916	367	Gene3D	-	157	367	IPR027417	-
	Lan11g0916	367	PANTHER	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	16	367	-	-
	Lan11g0916	367	Gene3D	-	55	156	IPR042101	-
	Lan11g0916	367	SMART	AAA_5	164	337	IPR003593	-
	Lan11g0916	367	SMART	SRP54_N_2	68	149	IPR013822	GO:0005525\|GO:0006614
	Lan11g0916	367	SUPERFAMILY	Domain of the SRP/SRP receptor G-proteins	65	142	IPR036225	-
	Lan11g0916	367	Pfam	SRP54-type protein, GTPase domain	165	366	IPR000897	GO:0005525\|GO:0006614
	Lan11g0916	367	PANTHER	BNAA04G26420D PROTEIN	16	367	-	-
	Lan11g0916	367	SMART	SRP54_3	165	367	IPR000897	GO:0005525\|GO:0006614
	Lan11g0916	367	ProSitePatterns	SRP54-type proteins GTP-binding domain signature.	340	353	IPR000897	GO:0005525\|GO:0006614
	Lan11g0916	367	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	162	366	IPR027417	-
	Lan11g0916	367	CDD	FtsY	166	365	-	-
	Lan11g0916	367	Pfam	SRP54-type protein, helical bundle domain	94	143	IPR013822	GO:0005525\|GO:0006614
	Lan11g0916	367	TIGRFAM	ftsY: signal recognition particle-docking protein FtsY	94	366	IPR004390	GO:0006614

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g0916	Lan-Chr11	9319211	9325906	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g0916	K03110		-	gmx:100791073	624.394

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan11g0916	11	9319211	9325906	Lan11g0916	11	9319211	9325906	ECH