Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0906 ATGGAAGGCGATGACGAAACCTCAGGTCCGATGATCGACGAAATCTACGCCAACGGCGACGGCGGCGACAACAACCGCGCCCGGAAACCTATTTTCAGCGGCGACCAACTCGACATCGAGGTCTACGCGAGCCTCTACGCGGGGCGAACCAAGATCATGCGGCTATTGTTCCTCGCCGATCGCTGCGGCGAGAAGAACAACACGACGATGCAACTCGACGCGCTTCGGATGGCGCATGATGAGATTAAGAAGGGAGAGAACACGCAGTTGTTCAGGGAAGTGGTTCAGAAGATCGATGGAAGGTTGGGACCTGATTATGATATGGATATGGCTTGGGCTGAGAACGTGGATCGTAGGGCTGAGCAGAAGAAGGAGAAGCTTGAGAATGAGCTTAATGCTTATAGGACAAACTTGATTAAAGAAAGCATAAGAATGGGATACAACGATTTTGGGGACTTTTACTATTCTCATGGTCAACTGGGGGATGCGTTCAAAAGTTATGTACGCACCCGGGATTATTGCACCACATCAAAGCACATTATTCATATGTGTATGAGTGCAATTCTGGTCAGCATTGAGATGGGTCAATTTACTCATGTTACAAGCTATGTTAGCAAGGCTGAACAAGCACCAGAGTCCCTTGACCTGATAACAGTTGCAAAGCTACGTTGTGCTGCAGGATTGGCAAATCTAGAGGCCAAAAAGTACAAGCTTGCTGCCCGAAAGTTTCTGGAAGTCGGCTCAGAACTGGGAAGTCACTATAATGATGTAATTGCATCTCAAGATGTAGCAACCTATGGAGGACTTTGTGCACTTGCAACATTTGATCGATCAGAGTTGAAGAGCAAAGTTATAGACAATATCAACTTCCGGAATTTCTTAGAGTTGGTACCCGAAGTAAGGGAACTGATAAATGATTTTTACTCAAGCCACTACGCTTCATGTCTGGAATACCTTGGGAACCTCAAAGCCAATCTATTGCTTGACATACATTTGCATGACCATGTTGAGACACTTTATGATCAAATTCGTCATAAAGCCCTTATCCAGTATACACACCCATTTGTGTCTGTTGATTTGAACATGATGGCAAATGCATTCAAGACAACTGTTACTGGACTTGAGAAAGAACTTGAAGCTTTGATTACTGATAATCAGATACAGGCTCGAATAGATTCACACAACAAAATTTTGTACGCACGGCATGCAGATCAAAGGAATGCCACTTTTCAAAGAGTTCTAGAAACTGGAAGGGTATTTGATCGTGATGTTCGTGACATGTTGCTGAGATCTAATCTTATCAAGCATGAACACAATCTTCGGGCATCAAGGAAGCTTTGA 1341 0.4452 MEGDDETSGPMIDEIYANGDGGDNNRARKPIFSGDQLDIEVYASLYAGRTKIMRLLFLADRCGEKNNTTMQLDALRMAHDEIKKGENTQLFREVVQKIDGRLGPDYDMDMAWAENVDRRAEQKKEKLENELNAYRTNLIKESIRMGYNDFGDFYYSHGQLGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQAPESLDLITVAKLRCAAGLANLEAKKYKLAARKFLEVGSELGSHYNDVIASQDVATYGGLCALATFDRSELKSKVIDNINFRNFLELVPEVRELINDFYSSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRHKALIQYTHPFVSVDLNMMANAFKTTVTGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLETGRVFDRDVRDMLLRSNLIKHEHNLRASRKL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0906 446 Coils Coil 110 144 - -
Lan11g0906 446 Gene3D - 35 384 - -
Lan11g0906 446 Pfam 26S proteasome subunit RPN7 109 283 IPR045135 -
Lan11g0906 446 SMART PINT_4 334 417 IPR000717 -
Lan11g0906 446 PANTHER BNAA09G38820D PROTEIN 1 441 - -
Lan11g0906 446 PANTHER 26S PROTESOME SUBUNIT 6 1 441 IPR019585 -
Lan11g0906 446 SUPERFAMILY "Winged helix" DNA-binding domain 329 409 IPR036390 -
Lan11g0906 446 Coils Coil 439 446 - -
Lan11g0906 446 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 334 417 - -
Lan11g0906 446 Pfam PCI domain 299 400 IPR000717 -
Lan11g0906 446 MobiDBLite consensus disorder prediction 1 29 - -
Lan11g0906 446 ProSiteProfiles PCI domain profile. 235 405 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0906 Lan-Chr11 9155391 9159061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0906 K12175 - gmx:100812958 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0906 11 9155391 9159061 Lan11g0906 11 9155391 9159061 ECH