Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0905 ATGGCCACGCCGTCGCCGGACGCCGTCTCCACTTTCATGCGAATCACCGGATCCACCGAGTTCGTCGCCGTCCAGAAATTAGAGGAATATGGAGGCCATCTCAATGAAGCTGTTAATGCATATTTTGTTGAAGGGCAGAGGCAAAATCTTGTTGCTGCCCCACAATATGAGTACTCTGATGTGAATAATCAAAACCGTGCTGGATCACGTGGAATTTTACCTTTTCTCTCTGCTGCTAGAAGATTTAGACCTTCACTACTACTTGACCCAAATTATAGGAGAGAACTTAGAGATACAGTTAATGGGATCACTGCTCCTACACCCACCAATCATGCCCCACATACTCCCCATCCAGGAGAGGCAAGGGAAGTTCCTTCAGGATTCAATAATGCTTTTGAGATGCCTCATTATCAATCAGGATTGAGCTCTACAAATGCTAACAGGAACGGAAATTTAATATCAGATGGTCGAGGAGTTTATGGCACAGAGAATTACGAGAATGACTACAACTTAGATCAGTCAAGTACCTCACATTTTCTTGATAATGAGATAGAGGAAGCAATGATTCAAGCAGCAATTGAGGCTTCAAAGAAGGACGGCGGAGAAGGTTCTTCACGGAAGCAATTTGGTGCTCTTAATAGTTCATCTGACAGTGGGCTTCCTCAAAATAATATTCAACAAGAAGATGATGATTTAGCTCATGCACTTTCGTTGTCCAAAAAGATGGCAGAGCAGGAGGAAGCAATACGTGAGCAACAGAAAAAGGAAGGACACCGTAGACATGAATTATTGGCCAAGGGAGAGAATACCAATACTAGCAAAAGCATATCGGAGTGGGAAGGTATTTCTTATGATGAGCTTAGTGAAGCAGTGTTGATTGAGAGTGCACTTTTTGGTGAAATTCCCACCCATAGTTCCCACAAAATTTCATCTTTGCCTGGTCCACCACACCATCCAGAAAAAGCTGTGGATCCTAAGATTCAGTCTTTATCCAGTGCAGCATCACAATTATCAATAGACACTCAGTTGCTGAGACAACAACAGGATGCTGAATATCTAGAATCACTATTTGCTGATAAACAAAAGGAACTGAATTCTCTCAAGGAAGCTGAAACCCGTAGCCTGAAGGAAGAGGAATCACAAAAAAAAATGCTTGAAAGAAAGGAATTGGATAAAATGCTTGCTGAGAAAAACGTTAAGCTTTCAAATGAACCTCCGTCAGATGATAAAAATGCAATTACTATCGTTGTTCGAATGCCAGATGGCAGTCGCAGGGAGCGCCGATTTCTCAAAACTGACAAACTTCGGCTTCTTTTTGATTTCATAGACATTTCTGGAGTAGTGAAGCCTGGAACCTACAGAGTAGTAAAGTCATACCCGAGACGTGCTTACGGCACTAATGATAGTTCGTCAACCTTGAATGAAGTAGGCCTTAGCAGCAAGAATGAGGCTCTGTTTCTGGAGTTGATTTAG 1473 0.4243 MATPSPDAVSTFMRITGSTEFVAVQKLEEYGGHLNEAVNAYFVEGQRQNLVAAPQYEYSDVNNQNRAGSRGILPFLSAARRFRPSLLLDPNYRRELRDTVNGITAPTPTNHAPHTPHPGEAREVPSGFNNAFEMPHYQSGLSSTNANRNGNLISDGRGVYGTENYENDYNLDQSSTSHFLDNEIEEAMIQAAIEASKKDGGEGSSRKQFGALNSSSDSGLPQNNIQQEDDDLAHALSLSKKMAEQEEAIREQQKKEGHRRHELLAKGENTNTSKSISEWEGISYDELSEAVLIESALFGEIPTHSSHKISSLPGPPHHPEKAVDPKIQSLSSAASQLSIDTQLLRQQQDAEYLESLFADKQKELNSLKEAETRSLKEEESQKKMLERKELDKMLAEKNVKLSNEPPSDDKNAITIVVRMPDGSRRERRFLKTDKLRLLFDFIDISGVVKPGTYRVVKSYPRRAYGTNDSSSTLNEVGLSSKNEALFLELI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0905 490 SMART ubx_3 405 489 IPR001012 GO:0005515
Lan11g0905 490 Gene3D - 410 489 - -
Lan11g0905 490 SUPERFAMILY Ubiquitin-like 375 485 IPR029071 -
Lan11g0905 490 Pfam UBA-like domain 7 46 - -
Lan11g0905 490 Coils Coil 235 255 - -
Lan11g0905 490 Pfam UBX domain 408 488 IPR001012 GO:0005515
Lan11g0905 490 ProSiteProfiles UBX domain profile. 408 486 IPR001012 GO:0005515
Lan11g0905 490 PANTHER FAS-ASSOCIATED PROTEIN 1 252 - -
Lan11g0905 490 PANTHER FAS-ASSOCIATED PROTEIN 273 490 - -
Lan11g0905 490 CDD UBX 414 488 - -
Lan11g0905 490 MobiDBLite consensus disorder prediction 196 225 - -
Lan11g0905 490 MobiDBLite consensus disorder prediction 207 225 - -
Lan11g0905 490 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 273 490 - -
Lan11g0905 490 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 1 252 - -
Lan11g0905 490 SMART uim 184 203 IPR003903 -
Lan11g0905 490 SMART uim 227 246 IPR003903 -
Lan11g0905 490 CDD UBA_Ubx1_like 6 42 - -
Lan11g0905 490 Coils Coil 350 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0905 Lan-Chr11 9138797 9146100 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0905 - K18726 gmx:100795740 559.296