Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0680 ATGGCATCAGCGGCAGCAACCACCGTTGTTCTTCCCCATAGGATTCCGACCACCACCAACGTTGCTCGCTGTTCTGTCTTGCCTTATCTTCCTCCTCGCGTCTCTTTCTTCTCACCTTCACTCAAACACTTCCAAGAGTCCCAAAAATCTTCTCTGCTTCAGATCAGAGCTTCTTCAGATGAAACTTCTACTTCTCCAGATCCTAATGAGTTGATCTCGGATTTGAAGGAAAAGTGGGATGCTGTTGAAAACAAGTCTACAATAGTTCTTTATGGTGGTGGCTCTATAGTTTTTGTTTGGCTAACTTCAATTGTTTTGGGTGCCATCAACTCAGTTCCCCTGCTTCCTAAGCTTTTGGAGTTGGTAGGACTAGGGTACACTGGATGGTTTGTCTACCGATACCTTCTGTTTAAGTCTAGCAGAAAAGAACTTGCCACAGACATTGAAACACTGAAGAAGAAAATTGCTGGAACTGAATAG 480 0.4396 MASAAATTVVLPHRIPTTTNVARCSVLPYLPPRVSFFSPSLKHFQESQKSSLLQIRASSDETSTSPDPNELISDLKEKWDAVENKSTIVLYGGGSIVFVWLTSIVLGAINSVPLLPKLLELVGLGYTGWFVYRYLLFKSSRKELATDIETLKKKIAGTE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0680 159 PANTHER - 2 159 IPR033344 GO:0009579
Lan11g0680 159 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 74 157 IPR025564 -
Lan11g0680 159 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0680 Lan-Chr11 5714643 5717555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0680 - - gmx:100305578 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0680 11 5714643 5717555 Lan11g0680 11 5714643 5717555 ECH
Lan11g0680 11 5714643 5717555 Lan9g0955 9 16075423 16078288 LSH