Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0677 ATGGCAATTTCTCTGCTGAAAACCCCAACCAGTGTGCTTCACAGAAACCACAATCAACTCGCATTTGTCTCCAGAGAGGGTAGAGCAATGAGCTTTGTACCAATTTCGCAGAACAATAACAGAAGATCGCGTTCTTTCCCCATTGTGTCAATGGCAGCCACACCGGTTCAAACTTTTCTTGAAAAGTCTGTGCCTTCGTCACAGAACACTGGCCATCCAATAATGGTTAATGCATGTACTGGAAAAATGGGAAAGGCTGTCATTGAAGCAGCACAAGCTGCTGGATTGCATGTTGTTCCTGTGTCATTTGGGCTTGAAGAGGAATCTGGGAAAACTTTTCAGATTGGTGAGATTGAGTTTCTTGTGCATGGTCCTTCTGACAGGGAAAGCGTTCTTGCATCTGTTCTTGATAAATATCCAGATTTGATTGTTGTGGACTACACAGCACCAACTGCAGTAAATGGTAATGCAGAGTTATACTGTAAGCTTGGGGTGCCCTTTGTGATGGGCACCACTGGTGGAGATAGGGAGCTGTTGCGTAAGACTGTTGAAGACGCAAAGGTTTATGCTGTGATATCTCCACAAATGGGAAAACAGGTTGTTGCTTTTCTTGCGGCTATGGAAATTATGGCAGAGCAGTTTCCCGGTGCCTTCTCTGGGTATTCCTTGCAGGTATTGGAGTCTCATCAGGCCGGCAAAGCTGATGCATCTGGAACTGCCAAGGCTGTGATTTCTTGCTTTGAAAAACTGGGGGTGTCTTTCAATATGGATGAGATACAATTGATCAGGGATCCCAAGCAACAACTTGAAATGGTCGGCGTCCCGGAGGAGCACTTGGCTGGTCATGCATTCCATATGTATCATTTGACATCACCTGACGAAACAGTTTCATTTGAATTCCAACATAATGTTTGTGGTAGATCAATCTATGCAGAAGGCACTGTTGATGCTGCACTTTTCTTAGCTAAGAAGATTGAATCAAAGGATCAGAAGAGAATATACAATATGATCGATGTCCTGCGAGAGGGTAACATGCGATGA 1041 0.4438 MAISLLKTPTSVLHRNHNQLAFVSREGRAMSFVPISQNNNRRSRSFPIVSMAATPVQTFLEKSVPSSQNTGHPIMVNACTGKMGKAVIEAAQAAGLHVVPVSFGLEEESGKTFQIGEIEFLVHGPSDRESVLASVLDKYPDLIVVDYTAPTAVNGNAELYCKLGVPFVMGTTGGDRELLRKTVEDAKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKADASGTAKAVISCFEKLGVSFNMDEIQLIRDPKQQLEMVGVPEEHLAGHAFHMYHLTSPDETVSFEFQHNVCGRSIYAEGTVDAALFLAKKIESKDQKRIYNMIDVLREGNMR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0677 346 Gene3D - 74 340 - -
Lan11g0677 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 72 340 IPR036291 -
Lan11g0677 346 PANTHER DIHYDRODIPICOLINATE REDUCTASE 47 346 IPR023940 GO:0008839|GO:0009089
Lan11g0677 346 Pfam Dihydrodipicolinate reductase, C-terminus 200 340 IPR022663 GO:0008839|GO:0009089
Lan11g0677 346 TIGRFAM dapB_plant: dihydrodipicolinate reductase 74 346 IPR011859 GO:0008839|GO:0009089|GO:0070402
Lan11g0677 346 Pfam Dihydrodipicolinate reductase, N-terminus 73 196 IPR000846 GO:0008839|GO:0009089
Lan11g0677 346 Gene3D Dihydrodipicolinate Reductase; domain 2 198 305 - -
Lan11g0677 346 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE 1, CHLOROPLASTIC-RELATED 47 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0677 Lan-Chr11 5699816 5704565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0677 K00215 - gmx:100819889 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0677 11 5699816 5704565 Lan9g0957 9 16090251 16094747 LSH