Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0620 ATGCAGCAGACACCGCAAATGGTTCCCGTTATGCCTTCATTTCCACCTACAAACATAACCACCGAACAGATTCAAAAGTATCTTGATGAGAACAAGAAGCTGATTTTGGCAATATTGGACAATCAAAATCTTGGAAAGCTTGCTGAATGTGCCCAGTATCAAGCTCAGCTTCAAAAAAACTTGATGTATTTAGCAGCAATTGCTGATGCCCAGCCACAAACACCAACAATGCCTCCACAGATGGCGCCACACCCCGCGATGCAACAAGGTTTCTATATGCAACATCCTCAGGCCGCAGCAATGACTCAGCAGCCAGGACTTTTCCCCCAAAAGATGCCATTGCAATTCGGTAGTCCACATCAAATGCAGGAGCAGCAACAGCAGCAGCTACACCACCAACAGCAGCAGGCCATCCAAGGACAAATGGGACTCAGACCTGGAGGCCCGAACAATGGCATGCATCCCATGCATAGCGAGGCTACTCTTGGAGGTGGCAGCGGTGGTGGTCCACCTTCAGCCCCTGGTCCAAACAATACACGTGGCAGAAGCAAACAAGATGCTTCTGAGTCTGGGGCAGCTGGTGGAAATGGACAAGGCATCTCAGCTGGCGCGCATAACAGTGGAGATGGTGAATCGTCTTATTTGAAAGGATCAGAAGAGGCAAAGTGA 669 0.4948 MQQTPQMVPVMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPTMPPQMAPHPAMQQGFYMQHPQAAAMTQQPGLFPQKMPLQFGSPHQMQEQQQQQLHHQQQQAIQGQMGLRPGGPNNGMHPMHSEATLGGGSGGGPPSAPGPNNTRGRSKQDASESGAAGGNGQGISAGAHNSGDGESSYLKGSEEAK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0620 222 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 164 IPR044779 GO:0003713
Lan11g0620 222 MobiDBLite consensus disorder prediction 172 213 - -
Lan11g0620 222 MobiDBLite consensus disorder prediction 116 141 - -
Lan11g0620 222 MobiDBLite consensus disorder prediction 108 222 - -
Lan11g0620 222 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Lan11g0620 222 PANTHER BNAA09G51550D PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0620 Lan-Chr11 5024580 5028441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0620 - - vun:114167142 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0620 11 5024580 5028441 Lan11g0620 11 5024580 5028441 ECH
Lan11g0620 11 5024580 5028441 Lan9g1004 9 16969859 16972715 LSH