Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0614 ATGGAACTCGACAACATCTACTCCTTCCTTGATTCACCAGACAACGATGACGATGACATATCTGATCTCCCTCATCGTTCCATCGATGAGATTCTCAATGACTGTGACACTTCCTCTTCATCATCACCTTCTCCTCCTTCTTCTCCTAAACCCTCTCCCTCTCTCAATCATTCTCTCGTAACCCTAAATTCTCACAATTCGGTTCGCTCCAAACCCGGTTCGTTTTCTCGACCGGATGAACCGTATCGGACCAGGCCGTTCTCGTCTCTGTTCGCTGGGGTGAGGTCCAATGCGAAACCTGGTGCGGCGTTGGCGGCTGCTGCTGCCGCTTCTAGATCTGTTCTGACGCCTCATGCCGCCGCGATGAGGAGAGCAGGGAGCGGGTCTTTGCAGAAAGTTGCATCGTCAGTTGCGGGGAGTGTTGAACCGAGTTTGATCCGCGGCGGTGGTAGTGGTTTTGATGATGTTTCTTCTTCCAAAGGTGAATTGGGTGATTCTAGTGATAAATTCGGTGGTTCTCAATCTTCTAGTGTAGAAAATTTTAATGAGGTAACAACTAAAGTTGAAAAATTTCAGAATATTGATGAGATAAATGATGCAGAATTAGCAACTGAAGTGGATGATTCAATTTTAAAGGCTGATAATATTATTGGCAGTGAGGTTCATAATGATTATTCTTTAGTGAGTAAGGAGAAGAGTGATTTGGATGAGGATGAACCTGATTCTGAGAAGAATATGAATTATGCACCTTTTACCGACAATGATGAAAAACCTAGTATTACTAATCTTGATATTAGTGATAAGAGTGTCAGTGAGAATGGGTTGATGATTGAAGCTGTGGAAACAGAAGAACTAGTGAATGGTAGTTGTTCTGTGGAGGACAGTTATAATGAGGTGAATGTTGGTGACAATGATGACAGTAGTTCGATAAGTCAAGATGTTAATGAGCTAGTTGAAGGTATACTTGAGGAACTAGAGAGGGGAAGGGACACTGGGAGAGGAGACGAAAAATTAAAGTTTTCAAAGAAGCCACTTGAATTAGCTGAAGAACTGGAGAAGAAGCATGCTTCAACCGGTTTTCATTTGGAAGAGGGTGCTGCTGCCCAGCCAATGAGGCTGGAGGGCGTTCGAAGAGGGTCCACGGCAGTGGGATATTTTGACGCTAATACTGATAATGCTGTCACACGAGCCATTTCATCCCAAGCCTTCAGGCACGAACACGGTTCAGCTCAAGTGTTGGCAGTTCATGCCAATTACATTGCAGTAGGAATGACAAAAGGGCTCATTGTTGTAGTACCCAGTAAATATTCCATTTATCATGCTGACAACACTGGCGGAAAGATGTTGATGCTTGCTGAACAAGGTGATCGATTACATGCTCCAGTAACTTCCATGTCTTTCAATCAACAAGGAGACTTTCTTTTAGCTGGTTATGGTGACGGCCATGTTACTCTCTGGGATGTACAGAAAGGTGTAGTAGCCAAAGTCATTAGCGGAGAGCATACAGTGCCTGTAGTGCATACGCTGTTTCTTGGACAGGATCCTCAGAATACTCGTCAGTTTAAAGCAATTACTGGTGATTGTAAGGGTCTGGTTCTCTTACACAGTTTCTCAGTGGTCCTTTTGCTTAATACATTCAAAATCAAAACTCAGTGTCTTCTTGATGGGCAAAGAACGGGCTTAGTGCTATCAGCTTCACCACTCCTTTCTGATGAATTCAGTGGAAGTGCTTCCATCCCTGCCAGCAGTTTAAGCAGCATGATGGGAGGTGTAGTTGGGGGAGATGCAGGTTGGAAACTCTTCAATGAAGGCTCTTCTTTTGTTGAAGAAGGGGTGGTTGTATTTGTCACCTATCAAACTGCTTTGGTGGTACGACTGACTCCTAAGTTGGAAGTTTATGCTCAACTCTCTAGGCCAGATGGAATTCGGGAGGGTTCCATGCCATATACTGCATGGAAACACATGGCACAAACATGTAGTTCTACTGAGAACAATTCTGCGGAATCTGTGGAAAAAGTTTCGTTGCTTGCAATTGCTTGGGAACAAGAAGTTCAGGTTGCAAAGTTGGTCAAATCAGATTTGAAAGTATATGGGAAATGGACTCTTGAAAGTGCAGCTGTAGGTCTGGCATGGTTGGACGATCAGATGCTGGTAGTTCTCACTTCAACTGGACAACTTTATTTATTTGCCAAGGATGGTACTGTCATTCACCAAACAAGTTTTGCTGTAGATGGGATTGGAGGCGATGATCTTGTTTCTTATCATACTCACTTCATCAATATATATGGAAATCCTGAGAAAGCTTATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTATATACTTGGTCCAACACACCTGGTCATTTCTCGTCTTCTCCCTTGGAAAGAGCGTATTCTTGTATTGAAGAAAGCAGGTGACTGGATAGGAGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTGTTGACCTTCCTAGAACCTTGGATGCTGTACATGAGGCCATAATGCCCTTCTCGGTGGAGTTGCTGATATCATATGTCGATGAAGTGTTCTCCTATATTTCAGTGGCATTCTGCAACCAAATTGGAAAATTGGATCAATCCAATGATTCAAATAGTAGAAACAATTCAGTGCATTCTGAGATAAAGGAGCAATACACCCGTGTCGGTGGAGTTGCTGTTGAATTTTGTTGTCATATCAAACGGACAGACATCCTTTTTGACAAAATTTTCTCAAAGTTCATGGATACTCATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAACCATATATTTTAAAGGACATGCTTGGATCTCTTCCTCCTGAGATAATGCAAGAACTGGTAGAGTATTATAGCTCCAAAGGGTGGTTGCAGCGGGTTGAGCAATGTGTGCTTCACATGGATATCTCATCCTTGGATTTTAATCAGGTTGTCAAATTATGCCGGGAGTGTGGACTATATAGTGCTCTGGTGTATCTATTTAATAAAGGCTTGGACGATTTTAGGGCACCTCTGGAGGAACTGTTTGCAGTCTTACAAAATAGCGAAAAGGAAAATGCTACTGCACTCGGGTATAGAATGTTAGTTTATCTCAAGTATTGCTTTACAGGTCTTGCTTTTCCACCAGGCCATGGAACCATTCCTCGTACACGTTTACCATCTCTTAGAAAAGAACTTGTAGAGTTTTTGTTAGAGGAATCAAATATGCATAAATCACAAAAAGTTTCAGATTTTGTATCCAAAGGACCCTACCTGAATCTATATCTACTCTTAGAGTTAGACAGTGAAGCTACGTTGGATGTCCTCAAATGTGCTTTTGTGGTTGATGAAATTTCAAATGCCCTCACATCTTCGTTGAGTACAGATGATAGCTCTATTGAGGATGCAAAAATAGAAACTGATAATGTTACTGAAACTCAAAATACTTTGGTTCAGAGCACAGTAGATGCTCTCATTCAAATAATTGATATGAATGTTGTTACGACAGATACCACCTCAAGTAGTGGTGATGATGGATTGTTAAAAGAGTGGCCTTCAAAGGACATAGTGTATCTGTTTGAGTTCATTTCTTACTATGTTGCTCTCCAAAGAGCTAAAGTCTCAAAAGGTGTGTTGTGTCAAATATTGAAATATTTGACAACAGATAGTTACTTTACAACTAATGTTTCTAGTCATAGTTCAACTCCAAAAAATAGAGAAAAGCAAGTGCTTGCACTTCTGGAAGTACTGCCTGAGTCAGAGTGGGATACATCATATGTGCTAGAGCTATGTGAAAGAGCCCAGTTTCACCAGGTTTGTGGGTTGATTCATACCATCAGACATGAGCCTGTGGCTGCCTTAGATAGTTATATGAATGATGTAGATGAGCCTGTTCATGCGTTCTCCTTCATTAACAGAACATTGTCACAGTTGACTGGCAACAACCATGCTGCAATTCGATCAGCAGTCATATCTCGAATTCCTGAGTTGATTGAATTAAGCAGGGAGGGTACGTTCCATATGGTTATCAGTCATTTTAGTGATGAAAGTGCACACATCCTCACTGAACTTCACTCGCATCGAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTCCACTTATTTGGCACCCTAGACTTATCTAAATTGAGAAGGGATCATATTATGAATCCATGTAATGATAAGCAGGTTAAAGATTACCACCAAGGACTCAGTGACTACTTAGAGAACATTTCTAATTTCCCCAAGTATATTCGTGAAAATCCTATCCATGTCCCTGATGATCTTATTGAGCTTTACCTTGAGTTATTATGCCAGTATGAAGGGGGTTCAGTTCTCAAGTTTCTCGAAATGTTTGATAGCTATCGTGTCGAACAATGTTTACGCCTGTGCCAAAAGTATGGCATTATTGATGCTGCTGCATTTTTATTAGAAAGGGTTGGTGATGTTGGAACTGCTCTTTCACTTACACTTTCAGATCTGAATGATAAATTTGTTGAGCTTGATGCCGCTGTCGAAACTGTAGTTTCAAGCCAATCCTTGGGTGGTTCTTCCAATGTGGAAGTATTCAACATTGTTTCAAGAATTAAGGAGGTGAATGACATACACAAGTTATTGCATGCCTGCATTGGTCTGTGTCAGCGGAACACTCCTCGTCTAAATCCTGAAGAATCAGAGGCACATTGGTTTAAATTACTTGACTCGTTTTGTGACCCATTGATGGATTCAAATGCTGAAGAGAGAGCAAATGATAGAAACAATTATTTTGGAGTGCTAGCTGGATTAGATGATTCACAACCAGATAAAAACACATATAAAAGCAGTTGGAAAATCTCGAAGTCCCGAAATGGTCAAATATTGAGAAGATTGCTATCCCAGTTCATTAAAGATATTGTTGAGGGAATGATAGGTCTTGTTCACCTTCCAGCTATCATGTCCAAACTCCTGTCTGATAATGGGACTCAAGAATTTGGCGATTTTAAACTCACCATATTGGGTATGCTGGGAACATATGGTTTTGAAAGAAGAATTCTGGATGCTGCCAAATCCTTGATAGAGGATGACACGTTTTATACTATGAGTTTACTGAAGAAAGGGGCATCTCATGGATATGCTCCCAAGAGTCTAGTGTGCTGTATTTGTAATTGCCTCCTAACAAAGAACTTCATTAGCTCCGGAATTCGAATTTTCAACTGTGGCCATGCAATTCATCTCCAATGTGAAGCTCTGGAAATTGAGTCATCAAGCAGAGGTTCTTCACCTGGATGCCCCATATGCATGCCTAACCAGAAACCCCTACCGTCTAGAAACAAATCAGTTATTGCAGAGAATGGCTTGATCAATAAATTCTCATCAGCACGCCAATACCCTCATGGTAGTACTGTTCATCCGCATGAAAGCGATTTATCAGAGAATATGTATGGGCATCAACAGATATCGCGGTTTGAGATGTTGAACAGCTTGCAGAAAAATCAGAGATTTATCCAAATAGAAAACTTGCCGCAGTTGAGGCTTGCCCCGCCTGCTGTGTACCATGAGAAGGTAAATAAAGTCCCAGGTTTTCTGGCAGGAGAACATAGCAATAGTTCTGCAGTTGTAGAGAAACAAAGTAGAAACAAGCAAAACCGGGAGCTTAGAGTTAAAGGTTCATCAATTCGATTTCCTTTAAAATCAAGTATATTTGGTAAAGAGAAAACAAGTAAGCGGTGA 5718 0.4119 MELDNIYSFLDSPDNDDDDISDLPHRSIDEILNDCDTSSSSSPSPPSSPKPSPSLNHSLVTLNSHNSVRSKPGSFSRPDEPYRTRPFSSLFAGVRSNAKPGAALAAAAAASRSVLTPHAAAMRRAGSGSLQKVASSVAGSVEPSLIRGGGSGFDDVSSSKGELGDSSDKFGGSQSSSVENFNEVTTKVEKFQNIDEINDAELATEVDDSILKADNIIGSEVHNDYSLVSKEKSDLDEDEPDSEKNMNYAPFTDNDEKPSITNLDISDKSVSENGLMIEAVETEELVNGSCSVEDSYNEVNVGDNDDSSSISQDVNELVEGILEELERGRDTGRGDEKLKFSKKPLELAEELEKKHASTGFHLEEGAAAQPMRLEGVRRGSTAVGYFDANTDNAVTRAISSQAFRHEHGSAQVLAVHANYIAVGMTKGLIVVVPSKYSIYHADNTGGKMLMLAEQGDRLHAPVTSMSFNQQGDFLLAGYGDGHVTLWDVQKGVVAKVISGEHTVPVVHTLFLGQDPQNTRQFKAITGDCKGLVLLHSFSVVLLLNTFKIKTQCLLDGQRTGLVLSASPLLSDEFSGSASIPASSLSSMMGGVVGGDAGWKLFNEGSSFVEEGVVVFVTYQTALVVRLTPKLEVYAQLSRPDGIREGSMPYTAWKHMAQTCSSTENNSAESVEKVSLLAIAWEQEVQVAKLVKSDLKVYGKWTLESAAVGLAWLDDQMLVVLTSTGQLYLFAKDGTVIHQTSFAVDGIGGDDLVSYHTHFINIYGNPEKAYHNSVAVRGASIYILGPTHLVISRLLPWKERILVLKKAGDWIGALNMAMTLYDGHAHGVVDLPRTLDAVHEAIMPFSVELLISYVDEVFSYISVAFCNQIGKLDQSNDSNSRNNSVHSEIKEQYTRVGGVAVEFCCHIKRTDILFDKIFSKFMDTHVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSSKGWLQRVEQCVLHMDISSLDFNQVVKLCRECGLYSALVYLFNKGLDDFRAPLEELFAVLQNSEKENATALGYRMLVYLKYCFTGLAFPPGHGTIPRTRLPSLRKELVEFLLEESNMHKSQKVSDFVSKGPYLNLYLLLELDSEATLDVLKCAFVVDEISNALTSSLSTDDSSIEDAKIETDNVTETQNTLVQSTVDALIQIIDMNVVTTDTTSSSGDDGLLKEWPSKDIVYLFEFISYYVALQRAKVSKGVLCQILKYLTTDSYFTTNVSSHSSTPKNREKQVLALLEVLPESEWDTSYVLELCERAQFHQVCGLIHTIRHEPVAALDSYMNDVDEPVHAFSFINRTLSQLTGNNHAAIRSAVISRIPELIELSREGTFHMVISHFSDESAHILTELHSHRRSLFLYLKTLIELHLFGTLDLSKLRRDHIMNPCNDKQVKDYHQGLSDYLENISNFPKYIRENPIHVPDDLIELYLELLCQYEGGSVLKFLEMFDSYRVEQCLRLCQKYGIIDAAAFLLERVGDVGTALSLTLSDLNDKFVELDAAVETVVSSQSLGGSSNVEVFNIVSRIKEVNDIHKLLHACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSNAEERANDRNNYFGVLAGLDDSQPDKNTYKSSWKISKSRNGQILRRLLSQFIKDIVEGMIGLVHLPAIMSKLLSDNGTQEFGDFKLTILGMLGTYGFERRILDAAKSLIEDDTFYTMSLLKKGASHGYAPKSLVCCICNCLLTKNFISSGIRIFNCGHAIHLQCEALEIESSSRGSSPGCPICMPNQKPLPSRNKSVIAENGLINKFSSARQYPHGSTVHPHESDLSENMYGHQQISRFEMLNSLQKNQRFIQIENLPQLRLAPPAVYHEKVNKVPGFLAGEHSNSSAVVEKQSRNKQNRELRVKGSSIRFPLKSSIFGKEKTSKR* 1906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0614 1905 MobiDBLite consensus disorder prediction 247 262 - -
Lan11g0614 1905 ProSitePatterns Trp-Asp (WD) repeats signature. 474 488 IPR019775 -
Lan11g0614 1905 ProSiteProfiles Zinc finger RING-type profile. 1714 1762 IPR001841 -
Lan11g0614 1905 MobiDBLite consensus disorder prediction 230 244 - -
Lan11g0614 1905 CDD RING-H2 1714 1763 - -
Lan11g0614 1905 MobiDBLite consensus disorder prediction 123 181 - -
Lan11g0614 1905 SUPERFAMILY RING/U-box 1708 1765 - -
Lan11g0614 1905 PANTHER - 276 1833 - -
Lan11g0614 1905 ProSiteProfiles Trp-Asp (WD) repeats profile. 462 496 IPR001680 GO:0005515
Lan11g0614 1905 Pfam Region in Clathrin and VPS 1431 1499 IPR000547 GO:0006886|GO:0016192
Lan11g0614 1905 SUPERFAMILY WD40 repeat-like 405 728 IPR036322 GO:0005515
Lan11g0614 1905 MobiDBLite consensus disorder prediction 53 73 - -
Lan11g0614 1905 PANTHER VACUOLAR PROTEIN SORTING VPS41 276 1833 IPR045111 GO:0006623
Lan11g0614 1905 Gene3D - 377 523 IPR015943 GO:0005515
Lan11g0614 1905 MobiDBLite consensus disorder prediction 1862 1885 - -
Lan11g0614 1905 MobiDBLite consensus disorder prediction 230 262 - -
Lan11g0614 1905 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1371 1536 IPR000547 GO:0006886|GO:0016192
Lan11g0614 1905 MobiDBLite consensus disorder prediction 1 86 - -
Lan11g0614 1905 Pfam Golgi CORVET complex core vacuolar protein 8 930 1114 IPR025941 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0614 K20178 - gmx:100785710 2687.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0614 11 4928758 4939909 Lan11g0614 11 4928758 4939909 ECH