Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0613 ATGTCTTTCTCTGCAACCAAGTTTGTTCACCCTCTTCCTCTCAATTCCTCCACCCCTTCTCCCAGATCTACTGAAAAATCTCTCTCTTTTGATCCATCATTCAAAGCTACTTCCTCTTTTGTTGGATCCACACACAAACTTCGATTCAATGCTTTCTCTAAGTCTCTTTCTCAACGCCGTTCATCATCTTCACATATTGTTGCTGTCTCCGATGTTGTCAAGGAGAAGAAGCTCAAAACTAACTCCAATCTGCTTATTACAAAAGAGGAAGGTTTGGATCTCTATGAAGACATGGTATTAGGGAGGTCATTTGAGGACATGTGCGCCCAGATGTACTACAGGGGCAAAATGTTTGGTTTTGTTCACTTGTACAACGGCCAAGAAGCTGTGTCAACTGGGTTTATCAGGCTTCTGAAGAAGGAAGATTATATAGTGAGCACCTACAGGGACCATGTCCATGCACTGAGTAAGGGAGTCCCGGCTCGCAGTGTGATGAGTGAACTCTATGGGAAGGCCACAGGAATCTGCCGAGGTCAGGGCGGTTCAATGCATATGTTCTCGAAAGAGCACAATCTGATTGGTGGGTTTGCCTTCATTGGTGAAGGAATTCCAGTGGCCACTGGGACTGCATTTACATGCAAGTACAGAAGAGAGGTTCTGAAAGAGCCAGGTGCTGATAATGTGACAGTCGCATTTTTTGGAGATGGGACTTGTAATAATGGGCAATTCTTTGAATGCCTGAACATGGCAGCTTTGTGGAAGTTGCCAATTATATTTGTGGTCGAAAACAATTTGTGGGCTATTGGGATGTCACATCTCAGGTCAACTTCTGATCCTCAGATATGGAAGAAAGGACCAGCATTTGGGATGCCAGGGGTTCATGTAGATGGGATGGATGTTTTGAAGGTCAGAGATGTGGCAAAGGAGGCAATCGAAAGAGCCAGAAGAGGAGAGGGACCAACTTTGGTGGAATGTGAGACCTATAGATTTAGAGGACACTCATTGGCTGATCCCGATGAGCTTCGTGACCCTGCTGAGAAAGCAAAGTATGCTACCAGGGATCCCATCGCTGCACTGACCAAATACATTCTCGAGAACAAATTAGCCAGTGAACAAGAATTGAAGAGCATAGACAAGAAAATCGAGGAGCTCCTAGATGAAGCTGTTGACTTTGCAGACGCGAGTCCTCATCCGGAACGCAGCCAGCTTTTAGAGAATGTGTTTGCTGATCCTAAAGGTTTTGGAATTGGTCCAGATGGCAAGTATAGATGTGAGGATCCAAAATTCACCCAAGGCACTGCTCATGTCTAA 1311 0.4523 MSFSATKFVHPLPLNSSTPSPRSTEKSLSFDPSFKATSSFVGSTHKLRFNAFSKSLSQRRSSSSHIVAVSDVVKEKKLKTNSNLLITKEEGLDLYEDMVLGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIRLLKKEDYIVSTYRDHVHALSKGVPARSVMSELYGKATGICRGQGGSMHMFSKEHNLIGGFAFIGEGIPVATGTAFTCKYRREVLKEPGADNVTVAFFGDGTCNNGQFFECLNMAALWKLPIIFVVENNLWAIGMSHLRSTSDPQIWKKGPAFGMPGVHVDGMDVLKVRDVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAKYATRDPIAALTKYILENKLASEQELKSIDKKIEELLDEAVDFADASPHPERSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAHV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0613 436 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 83 411 IPR029061 -
Lan11g0613 436 Coils Coil 367 387 - -
Lan11g0613 436 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 436 - -
Lan11g0613 436 CDD TPP_E1_PDC_ADC_BCADC 94 392 - -
Lan11g0613 436 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 88 409 IPR017597 GO:0004739|GO:0006086|GO:0043231
Lan11g0613 436 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 4 436 - -
Lan11g0613 436 Pfam Dehydrogenase E1 component 97 399 IPR001017 GO:0016624
Lan11g0613 436 Gene3D - 42 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0613 Lan-Chr11 4920589 4925209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0613 5 436 Acyl Lipid Metabolism Gene Families AT1G01090 77.778 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0613 K00161 - mnt:21402566 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0613 11 4920589 4925209 Lan11g0613 11 4920589 4925209 ECH