Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0603 ATGGTGGTAGCTGCAGGTTCTAAGGTTGCTAAGTTAAAATTGAGAAAAGGGAACAGTTCTGCTCATAATGTTATGAATGGTGATAACAGTGATGGAGATCTTTCTAGAATGAATAGTAGTGTGTGTCTTCCTTCAATTGCAGAGGTGGAAAGAGACCCTTCCTGTGTTTCATTCACCACTTTCAATATCTTGGCTCCTATTTACAAACGGATTGACCCACAGAACCCAGGCCTCCGAGAAAGTGACTTCAGATCTTTGTGGTTGGCCAGGAATGAAAGGATATTGGATAGTTTGCTTTCTGAATCACCTTCCATAATGTGCCTCCAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCACATGTATGAGGAGAGACTTGGGGATGCTGGCTACCATCTCTTCAAGCTTGCTCGAACCAACAACCGTGGAGATGGTCTGCTGACTGCCGTACATAAAGAATATTTAAGGGTTGTGAATTACCGAGAGTTGCTCTTAAATGATTTTGGTGATCGAGTTGCTCAGTTGTTACACATTCAATCAGTTTCCCCCTTTTTAAAAAACCAAAAGGGTGGTTTTCACCAAGAGTTTCTTATGGTGAACACACACCTGTTATTTCCTCATGATTCAAGTTTTTGTATAGTGAGATTGCATCAGGTTTACCAAATATTGCAATATGTGGAACTGTATCAGAGAGAAAACAGGCTCAAACCTATGCCTATTATACTTTGTGGTGACTGGAATGGAAGCAAGCGGGGGCATGTTTACAAGTTTCTTACATCACAGGGGTTTGTATCATCATATGATATTGCGAGTCAATATACTGACAGTTATGCAGATTCCAACAAGCAGTGGATTAGTCACCGAAACCATAGAGGAAATATATGTGGTGTTGACTTCATTTGGCTTTGCAATCCTAACCAAGCACGTAAACCGTTGAAGACAAGTTGGGCTGAAGCGGTGTTTAGTATGCTAAAGTACCAGTTACGAAAAGCTTCATTGTCTGAAGATAATGCATTTGCCTTTCTGAAGGGTGATCATTGTGTTGATTCTGTGACATATTTTAGCTTCTCTGAAGCTCTCCGTAAGGTAAAGTTATTTGATGCCCCTTATGGACTATGCTTCCAACAATTGCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGCGTCATCGACTATGAAGAATTCAAGCTAAAGATTTGGAATTCTACATGTCCAGAGCATGTGTTGGAAAATTTGATTGGATCAATAGAGGATACTAACACAGATCAAGAGCAAGAAACCATTGGTTTTAAGGTGAATAATGCAATGTTGTCCCCTCATGAAGTGGAGAAAGGACTGTGGCCAGAAGACTACTCTCTTTCTGATCATGCTAGACTCAGTGCTGTATTCTCACCAGCAAGGATGAGATGTTGTGTCACAAAATTGTAG 1434 0.4045 MVVAAGSKVAKLKLRKGNSSAHNVMNGDNSDGDLSRMNSSVCLPSIAEVERDPSCVSFTTFNILAPIYKRIDPQNPGLRESDFRSLWLARNERILDSLLSESPSIMCLQEFWVGNEELVHMYEERLGDAGYHLFKLARTNNRGDGLLTAVHKEYLRVVNYRELLLNDFGDRVAQLLHIQSVSPFLKNQKGGFHQEFLMVNTHLLFPHDSSFCIVRLHQVYQILQYVELYQRENRLKPMPIILCGDWNGSKRGHVYKFLTSQGFVSSYDIASQYTDSYADSNKQWISHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSMLKYQLRKASLSEDNAFAFLKGDHCVDSVTYFSFSEALRKVKLFDAPYGLCFQQLQDLWNQADVDGNGVIDYEEFKLKIWNSTCPEHVLENLIGSIEDTNTDQEQETIGFKVNNAMLSPHEVEKGLWPEDYSLSDHARLSAVFSPARMRCCVTKL* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0603 477 Pfam Endonuclease/Exonuclease/phosphatase family 86 316 IPR005135 GO:0003824
Lan11g0603 477 Gene3D Endonuclease/exonuclease/phosphatase 41 471 IPR036691 -
Lan11g0603 477 SUPERFAMILY EF-hand 354 402 IPR011992 -
Lan11g0603 477 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Lan11g0603 477 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Lan11g0603 477 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 473 - -
Lan11g0603 477 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 18 473 - -
Lan11g0603 477 SUPERFAMILY DNase I-like 47 269 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0603 Lan-Chr11 4800462 4805014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0603 121 472 EF-hand Containing Proteins AT1G02270 62.396 1.25e-163 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0603 - - lang:109338839 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0603 11 4800462 4805014 Lan11g0603 11 4800462 4805014 ECH