Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0574 ATGTTTCCAGAACTTATGGCTATCACTCTCGAACTTTCTCCATTTCTCATAAATTGTCTCTCTATATATGCATCCCAAACTTTCTCATCAAGCAAACATCTCAAGTTCCTCACATCACAAATCAGAAACACAAAACTCAATCTACTTTTCCTGCCAGTGAAGATGGGAACCAGAGTTGGTGACTTACTAAACGGGGATTTGGGAGCTACTGTGAACAATTTGTTTAACTTACCTGAAACAATGGAGAAACTAATGTTTCCTTCACGGGGTCATGAAAACCATGACAACAAAGGGGTTTCTAGCATCCCAGTCGATATTTTGGAAACTCCCAAGGACTATACATTCTTCATGGATGTTCCTGGTCTCTCCAAGTCTGAAATTCAGGTAACAATTGAAGATGAGAACACACTTGTTATACGAAGTAATGGGAAAAGAAAACGCCAAGATGGTGAGGATGAAGGTTGTAAGTATCTCAGGCTGGAGAGGAGAGTGCCTCAAAAGTTGCTGAGGAAATTTCGTTTACCTGAAAATGCCAATGTTTCAGTCATCACAGCTAAATGTGAAAATGGGGTTTTGACTGTGGTTGTTGAGAAGAACCCTCCACCTCCAATATCCAAAACAGTAGAAGTTGCTATTGCCTGA 642 0.4034 MFPELMAITLELSPFLINCLSIYASQTFSSSKHLKFLTSQIRNTKLNLLFLPVKMGTRVGDLLNGDLGATVNNLFNLPETMEKLMFPSRGHENHDNKGVSSIPVDILETPKDYTFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDGEDEGCKYLRLERRVPQKLLRKFRLPENANVSVITAKCENGVLTVVVEKNPPPPISKTVEVAIA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0574 213 Pfam Hsp20/alpha crystallin family 105 210 IPR002068 -
Lan11g0574 213 CDD ACD_sHsps-like 105 198 - -
Lan11g0574 213 Gene3D - 66 211 IPR008978 -
Lan11g0574 213 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 95 213 IPR002068 -
Lan11g0574 213 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 69 213 - -
Lan11g0574 213 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 69 213 - -
Lan11g0574 213 SUPERFAMILY HSP20-like chaperones 78 203 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0574 Lan-Chr11 4566874 4568193 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0574 K13993 - gmx:100803161 256.914