Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0552 ATGAGATTCCCTTTTGTTGGATTCATCACAATACTTGTCCTTGTTGTTTTTGCATCTCAATCCTGTTGCAGCTCTTCCACCCATGGAAATATAGAGAAGGAGAAAACTTTAGCAATTATAAAACCAGATGGATTGCTTGGTAACTATACTGATGATATCAAGAGAACAATTTTAGAGTATGGTTTCCGCATTTTTAAGGAAAAGACTGTTCAGTTTGATGAGGCTACTTTGAAAAGATTTTATGCAGAGCACTCTTCAAAGAGCTTCTTTTCTAGCCTTACAAAATACATGACAAGTGGACCGGTGTTAGTTATGGTTTTGGAAAAGGATAATGCAATTGCTGATTGGCGTGCTTTAATGGGCCCTACTGATTCAAGCAAGGCTAAGATTACTCATCCTCACAGCGTCAGAGCAATGTGCGGTTTAGATACCCAAAAGAATTGTGTTCATGGTTCTGACTCAACAAAATCTGCAGAAAGAGAGATATCATTTTTCTTCAGAGAGCTCTCTGCAGATATAATTACAGAACATGATGAACTGTAG 543 0.3775 MRFPFVGFITILVLVVFASQSCCSSSTHGNIEKEKTLAIIKPDGLLGNYTDDIKRTILEYGFRIFKEKTVQFDEATLKRFYAEHSSKSFFSSLTKYMTSGPVLVMVLEKDNAIADWRALMGPTDSSKAKITHPHSVRAMCGLDTQKNCVHGSDSTKSAEREISFFFRELSADIITEHDEL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0552 180 Pfam Nucleoside diphosphate kinase 34 168 IPR034907 -
Lan11g0552 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lan11g0552 180 SUPERFAMILY Nucleoside diphosphate kinase, NDK 33 169 IPR036850 -
Lan11g0552 180 Gene3D - 32 177 IPR036850 -
Lan11g0552 180 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 19 179 - -
Lan11g0552 180 PRINTS Nucleoside diphosphate kinase signature 36 58 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lan11g0552 180 PRINTS Nucleoside diphosphate kinase signature 80 99 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lan11g0552 180 PRINTS Nucleoside diphosphate kinase signature 100 117 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lan11g0552 180 PRINTS Nucleoside diphosphate kinase signature 147 166 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lan11g0552 180 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 19 179 - -
Lan11g0552 180 SMART ndk_5 33 173 IPR034907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0552 K20790 - gmx:100500470 293.123