Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0487 ATGGAAAAGGAAGAGCTAGCAGAGACAAAAGACACAAGTCCTCAAGCTGTTGAAAAGCTAAAAGGAGATTCATTTATTGTTCAACATGAAGACCAGGACAAAGAATCAAAGGATGTGGAAACTCTAAATATTGCTCATGATGGACCTGAGTTTGACCATCAAAGAGATGATATATCAGACCAGATAAATTCTCAAGTTGATGAAAATCTGGATGAAGATGCCTTTACCACTCAGAATGAAGACCGGGACGAAGAATCAAAGGATGTGAAAACTCAAAATGTGGGTCATGATGACCCCGAGTTTGACAACGAACAAGATGGTATACCAGACAAGGTAATTTCTCAAGCCGAAGAAAAGCTGGAGGGTGATACTTTTATTATTCAGAATGAAGATCAGGACAAAGAATCAAGGGAGGTGAAAACAAAAAATGTTGGCCATGATGGCCCTGAGTTTGTCAAAGAAGAAGATGGTATACCAGATAAGGTAATTTCTCAATCTGATGAAGAGCTGGAGGGTATTATTCAGAATGAAAATCAGGACAGAGAATCAGAGGAGGTGAAAACACAAAACATCGGTCATGATGGCCTTGAGTTTGCCAGTGAACATGATATATCAAATAAGATTAATGAGATGACAAATGTAAATTCGAATAGTGATGAGGAAATAAAAGGCAACGAGGCTGGAGAGTCCAAGTTGGCTCAGAGAATAGATGAAAGTAGGGATTTGCAGTGTCGAACTGAGGGAGATAATTTCGGGACCAGTAATGTTCCAGGTGAACTGTTTCAAATGGATGAGTGTAATTCCACCAAATCTGAAATTCAATTCAATGATGTTGGACAAGAGCGCTTTGGTGTTAAGGTGGATGATGACGAAGATTTTGAGTCTAAAAGTCTAGATAATAATTCTGGACAAAATGACTTTGATAAAGAGAAGGATGGGACTAAAAGCATGAAGTCAATAGAAATGAATCAAAATACAAATGACACTCCAAATGAGGAAATTAATATGGACCCGGTATTTGATGGAACAGAGGTTCCTGGGATTGAAGTTAGCCAAAGCACATCTACCCATAATTTGGATGCCAATCAGGAAAATCCACGTGTGGTCGAGAAGGCAGTAGCACTTAAAAACTTCGTTAGGGAGAAAAGTATAGTAGCAGTCTCCATTTTGCTGCGTGGCCTATCTCTAAAGCGTGATGGTTGTCCTATGAGTAATTCTGAGGATCAGGATAAGGATGGCTCAAATTTATCAAAAATCAGTGAATCTAAAGAGGTTTCTGAGAAGACTGATCAAAGGGAGGATTCAATAACAGAAGGTCCACCACAGCCCATAGCAATGAAAGGAAGGATTATAGTGTACACAAGACTAGCGTGCCAAGAATGTAAAGAGGTTAGACAATTTTTGTACGTAAAAAGACTTAGATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGATGGAGCTGGAGAAGAACTCTGGATCTACTTCTGTTCCCAAGGTTTTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGATAAAGACCTTAAATGAGTCTGGCAAGTTTGATGAGAAGATTGACTTTCTTATCACTGAAGCGCCACCATTTGAAGCCCCATTACCGCCACTTTCTGGAGAGGATGATGTGTCTACTAGTGGGGCACTTGATGAAATGGCTCTGATTGTCCGCAAAATGAAAGAATCTATTGTTGTGAAGGACAGATTTAGCAAAATGCGAAGGTTCACTAACTGCTTTCTTGGCTTCGAAGCTGTGGATTTCTTATCAGCAGATCAATATCTGGAAAGGAAAGAGGCTGTTGAATTTGCACGAAAGCTTGCAAGCAAGCTCTTCTTTCAACATGTTCTTGATGAGATTCTGTTTGAGGATGGTAATCACTTATATCGGTTTTTGGATGATGATCCAATAGTGGCATCTCAATGTCACAACATTCCAAGGGGAATAATTACTGTGAAGCCGAAGTCTATGACAGAAATAGCATCAAGGCTGAGGTTGATATCCTATGCAATGTTTGAAGCCTACGCCTCTGAAGACGGACGCCATGTTGACTATAGAAGCATTCATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATAGTAGAAACTCTCCAAAGAGTGGAAGTATGGGATTTGTCTAGAGAGGACAAGCTTGCTTTCTTTATTAATCTATACAATATGATGACCATCCATGCAATCTTGGTATGGGGTCATCCAGCTGGAGCACTAGAAAGAAGGAAATTGTTTGGAGAGTTTAAATATGTTATTGGTGCTTCCACTTACTCGCTTTCAGCTATTCAGAATGGCATTTTAAGAGGAAACCAGCGACCACCATATAACCTTATGAAGTTATTCGGCGCAAAAGATAAACGCTCAAAGGTGGCCCTCCCTTACCCTGAACCTCTTATTCATTTTGCTTTAGTATGTGGTACTCGATCTGGACCTGCACTTCGGTGCTATTCTCCTGGGGATATTGACAAAGAATTAATGGATGCAGCTCGCAGTTTCTTGAGAAGTGGGGGTGTTTTAATTGATTCGACTGCAAAGGTTGCATATGCTAGTAAGATCCTCAAATGGTTTAGTGTAGATTTTGGCAAGAATGAGGCAGAGATACTGAAGCATGTGTCAAACTACTTAGATCCAGCTGACTCACAAGTATTGTTGGATCTGCTTGCTTCTTCTGAGTTGAAGGTGATATATCAGCCTTATGATTGGGGTTTGAACTGCTAG 2751 0.4002 MEKEELAETKDTSPQAVEKLKGDSFIVQHEDQDKESKDVETLNIAHDGPEFDHQRDDISDQINSQVDENLDEDAFTTQNEDRDEESKDVKTQNVGHDDPEFDNEQDGIPDKVISQAEEKLEGDTFIIQNEDQDKESREVKTKNVGHDGPEFVKEEDGIPDKVISQSDEELEGIIQNENQDRESEEVKTQNIGHDGLEFASEHDISNKINEMTNVNSNSDEEIKGNEAGESKLAQRIDESRDLQCRTEGDNFGTSNVPGELFQMDECNSTKSEIQFNDVGQERFGVKVDDDEDFESKSLDNNSGQNDFDKEKDGTKSMKSIEMNQNTNDTPNEEINMDPVFDGTEVPGIEVSQSTSTHNLDANQENPRVVEKAVALKNFVREKSIVAVSILLRGLSLKRDGCPMSNSEDQDKDGSNLSKISESKEVSEKTDQREDSITEGPPQPIAMKGRIIVYTRLACQECKEVRQFLYVKRLRYVEINIDVYPSRKMELEKNSGSTSVPKVFFNEILIGGLSEIKTLNESGKFDEKIDFLITEAPPFEAPLPPLSGEDDVSTSGALDEMALIVRKMKESIVVKDRFSKMRRFTNCFLGFEAVDFLSADQYLERKEAVEFARKLASKLFFQHVLDEILFEDGNHLYRFLDDDPIVASQCHNIPRGIITVKPKSMTEIASRLRLISYAMFEAYASEDGRHVDYRSIHGSEEFARYLRIVETLQRVEVWDLSREDKLAFFINLYNMMTIHAILVWGHPAGALERRKLFGEFKYVIGASTYSLSAIQNGILRGNQRPPYNLMKLFGAKDKRSKVALPYPEPLIHFALVCGTRSGPALRCYSPGDIDKELMDAARSFLRSGGVLIDSTAKVAYASKILKWFSVDFGKNEAEILKHVSNYLDPADSQVLLDLLASSELKVIYQPYDWGLNC* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0487 916 MobiDBLite consensus disorder prediction 1 62 - -
Lan11g0487 916 CDD DEP 563 637 - -
Lan11g0487 916 Gene3D - 552 645 IPR036388 -
Lan11g0487 916 ProSiteProfiles Glutaredoxin domain profile. 438 539 - -
Lan11g0487 916 MobiDBLite consensus disorder prediction 403 435 - -
Lan11g0487 916 Pfam Glutaredoxin 450 506 IPR002109 -
Lan11g0487 916 Gene3D Glutaredoxin 445 530 - -
Lan11g0487 916 MobiDBLite consensus disorder prediction 293 333 - -
Lan11g0487 916 MobiDBLite consensus disorder prediction 222 245 - -
Lan11g0487 916 SUPERFAMILY Thioredoxin-like 446 528 IPR036249 -
Lan11g0487 916 MobiDBLite consensus disorder prediction 80 154 - -
Lan11g0487 916 MobiDBLite consensus disorder prediction 211 259 - -
Lan11g0487 916 ProSiteProfiles DEP domain profile. 567 640 IPR000591 GO:0035556
Lan11g0487 916 MobiDBLite consensus disorder prediction 1 154 - -
Lan11g0487 916 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 571 638 IPR000591 GO:0035556
Lan11g0487 916 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 915 - -
Lan11g0487 916 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 915 - -
Lan11g0487 916 SUPERFAMILY "Winged helix" DNA-binding domain 558 648 IPR036390 -
Lan11g0487 916 Pfam Protein of unknown function, DUF547 718 844 IPR006869 -
Lan11g0487 916 SMART DEP_3 567 640 IPR000591 GO:0035556
Lan11g0487 916 MobiDBLite consensus disorder prediction 318 333 - -
Lan11g0487 916 MobiDBLite consensus disorder prediction 399 442 - -
Lan11g0487 916 MobiDBLite consensus disorder prediction 293 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0487 Lan-Chr11 3735392 3741401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0487 - - ccaj:109814814 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0487 11 3735392 3741401 Lan15g0831 15 17481669 17486518 PCT
Lan11g0487 11 3735392 3741401 Lan14g0638 14 13310179 13315568 PCT
Lan15g0831 15 17481669 17486518 Lan11g0487 11 3735392 3741401 PCT
Lan14g0638 14 13310179 13315568 Lan11g0487 11 3735392 3741401 PCT