Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0476 ATGAGTGTAGACCTAAAGAAAACTGCCTCTAATGGCAATGAGAATTTGTCAATATCACAAGAACAGCAGGCACAGATCAATGAGGTGCGAAGGTTGATAGGGCCATTGTCTGGTAAGGCGTCTACTTATTGTTCTGATGCATCCATTGCAAGGTATTTAAGGGCACGAAATTGGAATGTCAAGAAGGCAGCTAAAATGTTGAAACAGTCCCTAAAATGGAGAGCAGAATACAAACCAGAGGAGATTCGCTGGGAAGAGGTTGCTCTTGAAGCAGAGACAGGGAAGATCTATAGATCAAATTATACTGACAAGCACGGGAGAACAGTCCTTGTAATGAGACCTAGCCGCCAGAACTCGAAGTCAACGAAAGGACAGATTAAGTATTTGGTATACTGTATGGAGAATGCTGTTTTAAATCTTCCAACACAACAAGAAAAGATGGTGTGGCTGATTGACTTCCAGGGTTTTAATTTGTCACATATATCAGTCAAGGTAACACGTGAGACTGCCCATGTATTACAAGACCATTATCCTGAACGGCTGGGTCTGGCAATACTGTACAATCCCCCTAAGTTCTTCGAACCATTCTTCACGATGGTGAAGCCACTGTTAGAGCCTAAGACTTTTAATAAAGTCAAGTTCGCTTACTCTGATGATCAAAACACCAAGAAGATCATGGAGGATTTGTTTGATATGGACCTTCTTGAATCTGCATTCGGTGGGAATGATGACACAGGTTTTGATATAAGTAAATATGCTGAGAGAATGAAAGAGGATGACAAGAAGAGTTCCTCTTACTGGACAGGAGAAAACTCTCCATCACCAGTCTCAAACATTGTTTCTTCTTTAGATTCGATTACCTTAGATGCTGACTCTGAGTCTGACAATGAGAAAGTAAACTCTTCCCCTGATCCTGAGATGGAGAAAGAGATCATCAACCCCAACAAGCACATTGTGGTTAATCATGTTGCTAGTAATGCTAGTGCAGATACGCATTAG 999 0.4134 MSVDLKKTASNGNENLSISQEQQAQINEVRRLIGPLSGKASTYCSDASIARYLRARNWNVKKAAKMLKQSLKWRAEYKPEEIRWEEVALEAETGKIYRSNYTDKHGRTVLVMRPSRQNSKSTKGQIKYLVYCMENAVLNLPTQQEKMVWLIDFQGFNLSHISVKVTRETAHVLQDHYPERLGLAILYNPPKFFEPFFTMVKPLLEPKTFNKVKFAYSDDQNTKKIMEDLFDMDLLESAFGGNDDTGFDISKYAERMKEDDKKSSSYWTGENSPSPVSNIVSSLDSITLDADSESDNEKVNSSPDPEMEKEIINPNKHIVVNHVASNASADTH* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0476 332 MobiDBLite consensus disorder prediction 291 308 - -
Lan11g0476 332 SMART sec14_4 90 244 IPR001251 -
Lan11g0476 332 CDD SEC14 92 242 IPR001251 -
Lan11g0476 332 PANTHER GH16843P 1 301 - -
Lan11g0476 332 PRINTS Cellular retinaldehyde-binding protein signature 48 70 - -
Lan11g0476 332 PRINTS Cellular retinaldehyde-binding protein signature 164 185 - -
Lan11g0476 332 PRINTS Cellular retinaldehyde-binding protein signature 233 242 - -
Lan11g0476 332 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Lan11g0476 332 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Lan11g0476 332 PANTHER CRAL-TRIO LIPID BINDING DOMAIN, CRAL/TRIO DOMAIN-CONTAINING PROTEIN-RELATED 1 301 - -
Lan11g0476 332 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Lan11g0476 332 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Lan11g0476 332 MobiDBLite consensus disorder prediction 287 308 - -
Lan11g0476 332 MobiDBLite consensus disorder prediction 260 279 - -
Lan11g0476 332 Gene3D - 3 272 IPR036865 -
Lan11g0476 332 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Lan11g0476 332 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0476 Lan-Chr11 3626185 3630516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0476 48 212 Acyl Lipid Metabolism Gene Families AT5G47730 27.368 5.87e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0476 - - gmx:100777106 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0476 11 3626185 3630516 Lan14g0644 14 13374727 13377966 PCT
Lan14g0644 14 13374727 13377966 Lan11g0476 11 3626185 3630516 PCT