Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g0260 | ATGAAGGGTAAAAGTCGTTTATTCACGATCGGGTTAGTTTCGTCATGGTACTCCTCAAACATTGGGGTACTTCTCTTAAACAAGTACCTTCTAAGCAATTACGGTTTCAAGTATCCAATATTCCTAACCATGTGTCACATGACCGCGTGTTCTCTTCTCAGCTACGTTGCAATTGCGTGGCTCAAAATGGTTCCGTTACAAACCATTCGATCAAGGGTTCAGTTCTTAAAGATCTCAGCACTTAGTCTCATATTTTGTGTTTCCGTCGTTTTTGGTAACATATCGCTACGCTATCTACCTGTGTCGTTTAACCAAGCTATTGGTGCAACCACACCGTTCTTCACTGCTGTGTTCGCTTATCTTATTACGCTTAAGAGAGAGGCTTGGCTTACCTATTTCACTCTTGTTCCGGTTGTCACTGGTGTCGTTATTGCTAGCGGGGGTGAACCTAGCTTCCATTTATTTGGGTTCATAGTATGTGTAGCGGCTACTGCTGCACGGGCCCTGAAATCAGTGTTGCAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCCGCTACACTTATAATGGAAGAAAATGTGGTTGGTATTACACTGGCTCTAGCCAGAGATGACATGAAGATCGTTTGGTATCTTCTATTCAATTCGACGCTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACAAAACATACCAGTGCTCTTACACTTCAGGTGCTTGGGAATGCTAAAGGGGCTGTAGCAGTTGTAGTTTCAATCTTGATATTTAGAAACCCAGTGTCGGTCACTGGAATGATGGGTTATGCCCTTACAGTCCTCGGAGTTATACTTTACAGCGAAGCTAAAAAAAGAAGCAAGTGA | 921 | 0.4267 | MKGKSRLFTIGLVSSWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPLQTIRSRVQFLKISALSLIFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYLITLKREAWLTYFTLVPVVTGVVIASGGEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDMKIVWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYALTVLGVILYSEAKKRSK* | 307 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g0260 | 306 | Pfam | Triose-phosphate Transporter family | 12 | 299 | IPR004853 | - | |
| Lan11g0260 | 306 | PANTHER | - | 3 | 305 | - | - | |
| Lan11g0260 | 306 | PANTHER | SOLUTE CARRIER FAMILY 35 | 3 | 305 | - | - | |
| Lan11g0260 | 306 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 197 | 300 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan11g0260 | Lan-Chr11 | 1667226 | 1669663 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan11g0260 | 1 | 306 | Organic Solute Cotransporters | AT3G11320 | 91.830 | 0.0 | 573 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g0260 | - | - | fve:105353064 | 568.926 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan4g0161 | 4 | 2577373 | 2578978 | Lan11g0260 | 11 | 1667226 | 1669663 | PCT | |
| Lan16g0684 | 16 | 9183492 | 9186725 | Lan11g0260 | 11 | 1667226 | 1669663 | PCT | |
| Lan11g0260 | 11 | 1667226 | 1669663 | Lan4g0161 | 4 | 2577373 | 2578978 | PCT | |
| Lan11g0260 | 11 | 1667226 | 1669663 | Lan16g0684 | 16 | 9183492 | 9186725 | PCT |