Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0215 ATGGCTGAAACCTCTGAGATGGGAATTATGGTTGATGGGATAAGGAGGGTGAGTTTGAGAGCTGAAATTGATACATCGTCACCGTTCGGGTCAGTGAAGGAGGCGGTGACCCGTTTTGGAGGAAGTGGACCTTGGATACCGTTTTACAAGCTTGGAGAGGCTTATAACAACATTGAAGACTTCGACATAAGGAAAGTGGAGGAACAAGCAACAAAGTTGGAGAAGGATTTGATAGTAAAAGAGCTTGAAACACTTGATGTGCTTGAAGAACTAGGAGCTACCAAAAGGATTGTAGAGGAATTAAAGCAGCAGCTACACAGAGAAGCAATGAAATGCCTTGTAACTCAAGATATAAATTCCCATGAACAGGTTGAAACTGCTCCTGTTATTAAAGAGATGAATCAAGAATTTCGTGGAAATATATTTAACAATGAAGAACATATATCACAAAACCCTTGCTCTATGCCCACACCTGGTCCCATGTTAATGGAGTTAAAACTAGCTAAAATGCAGCTTCATAAAACTATAAATGATCTTGGGGTGATACAATCCTCTGTTGAATCTTTGAATAAGAAGATGAAAAAGGAGAGACTTTTTCTTCAGAGGACACGCGAGAAGCTTGCATTAAAGTTTGCAGCCGTGTCAGCTCGAGAGAAGGCACAAGAAGAAGCAAGATCAAACCCACCAACAGCAGAAAGAAGTTGCACTTATGATAATCCCCGAATTTTTATGGAGAATTTCAAACCTTATACTGAGAAGAACAATAGAATGATCAAAACAAGATGTTCTGAAGTTTCAAAGCCCTTACATGGGTCCAAGATTGATGAGAATGGAATAAGTATTAAGACTACTGAGATGAGGTTTTTTGCAGCTAAAAAGATGGAAGAAGCCGCAATAGCAGCAGAAGCTGATGCACTTGCTAAAATCAAGGCTCTATCCGGTGCTGAAATATCATATAAATTTGCTCAGCCAGAACCTAAGAATGTGACTTTTGCCTTAGGGGAGGGTTCTCATCTTAACCCCAATGCTCTAATACCTGAAGAGTCTACTTTGAAGAAAGTAATAGATTCCAAATTCCAAATTGATGAAATAAATACTTTGGAACTGACCATTTTGAAAAGGTTGGAGGAAGCAACAGAAGAAGTTGTACACAGCAAACAACTCTTAACAGAGGCTTTAAACAGTGTTGAAACTGCAAGCAGAAAACAACATGCTGCTAAAGAGGCTCTAAGGAAATGGATTCCAATGGATGATCCTAATGGACAAGCAGTGTTTAACTCTATTAAGCCCAACAAGTTTGATCAAGCTGAAAATTGTTTGGATTCTTCTGTAGTGAAAGTAACCAAGTCAATAACAATGAACAATAATCAGAAGAAGCCTTTCTTAAGGTCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGAATATAATGCAACAAAGGAGATGGAAGAGCACAATGAAAGGCATAAGGTAGCATTGAGTCAAATGCTTCAAACATTGAAGGAAGATATAACTCTTCCTACTATACCTGAGAAAGATGAGAGTGATAGAAAGCAATTCACATCACAGAGGAAGAAGTTTGGATTCATCAAAATATCACTACCCTTGGGGAAGCTGAGTAAGAAAAGGGCATGA 1650 0.3873 MAETSEMGIMVDGIRRVSLRAEIDTSSPFGSVKEAVTRFGGSGPWIPFYKLGEAYNNIEDFDIRKVEEQATKLEKDLIVKELETLDVLEELGATKRIVEELKQQLHREAMKCLVTQDINSHEQVETAPVIKEMNQEFRGNIFNNEEHISQNPCSMPTPGPMLMELKLAKMQLHKTINDLGVIQSSVESLNKKMKKERLFLQRTREKLALKFAAVSAREKAQEEARSNPPTAERSCTYDNPRIFMENFKPYTEKNNRMIKTRCSEVSKPLHGSKIDENGISIKTTEMRFFAAKKMEEAAIAAEADALAKIKALSGAEISYKFAQPEPKNVTFALGEGSHLNPNALIPEESTLKKVIDSKFQIDEINTLELTILKRLEEATEEVVHSKQLLTEALNSVETASRKQHAAKEALRKWIPMDDPNGQAVFNSIKPNKFDQAENCLDSSVVKVTKSITMNNNQKKPFLRSTISMRDVLSRKQVPEEYNATKEMEEHNERHKVALSQMLQTLKEDITLPTIPEKDESDRKQFTSQRKKFGFIKISLPLGKLSKKRA* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0215 549 Coils Coil 63 83 - -
Lan11g0215 549 Coils Coil 88 108 - -
Lan11g0215 549 PANTHER WEB FAMILY PLANT PROTEIN 12 548 - -
Lan11g0215 549 Pfam Weak chloroplast movement under blue light 21 109 IPR008545 -
Lan11g0215 549 Pfam Weak chloroplast movement under blue light 163 413 IPR008545 -
Lan11g0215 549 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 12 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0215 Lan-Chr11 1376446 1379788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0215 - - gmx:100776514 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0215 11 1376446 1379788 Lan11g0215 11 1376446 1379788 ECH
Lan3g0990 3 21613162 21646111 Lan11g0215 11 1376446 1379788 PCT
Lan11g0215 11 1376446 1379788 Lan3g0990 3 21613162 21646111 PCT