Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0030 ATGTATGGTGGCGTTGAGGATGTTCCTGAAGACAAACATGAATCCAAAGTTCGCATGATTGGTGTTATAGATGAGAGTAATGAGATTAATGATTCCCCTGTTGAGCAAGTGCGGCTCACGGTTCCAATCACCGACGACCCTACAGTACCAGCACTAACATTCAGGACATGGTTTCTTGGGATAGGATCATGTATTCTCCTTTCCTTTGTGAACCAATTTTTTGGCTTCAGGACCAACCCTCTATACCTTTCTTCAGTGTCAGCCCAGATTGTAACCCTCCCACTTGGGAAACTAATGGCTGCAACACTTCCCTCAAGGAGATTCCAACTCCCATTGACAGAATGGTCTTTTACCTTAAATCCAGGGCCTTTCTCTTTGAAAGAACATGCCCTTATCACTATCTTTGCCAGCTCCGGGTCTAGCGGTGTTTATGCCATCAACATCATCACAATTGTTAAGGCTTTCTATCACAGGGACATCCATCCCGCTGCTGGTTATATGTTAGCACTATCAACCCAGATGCTTGGGTATGGATGGGCTGGGATTTTCAGGAAATTCCTTGTTGACTCCCCCTACATGTGGTGGCCTTCAAACCTGGTGCAGGTGTCTCTATTCAGGGCATTTCATGAAAAAGAAAGAAGGCCTAAAGGAGGAACCACAAGGCTGCAATTCTTTTTCATGGTCTTTGTATCAAGCTTTGCTTATTACATAATTCCAGGCTACTTCTTTCAAACAATAACAACTATATCCTCTGTTTGCTTGATTTGGAAAAAATCAATCACTGCACATCAGGTTGGTTCAGGCTTGTATGGCCTTGGCATTGGCTCATTTAGTCTTGACTGGAACACTGTTTCTGGCTTCTTAGGTAGTCCTTTAGCTGTACCTGGCTTTGCTATCATCAACATCTTGGCAGGATTTGTGATGCTTATATATGTTGTTATTCCCCTTTGCTATTGGAATAATGTATATGATGCAAAAAAGTTCCCCCTCATTAGTTCTAACACATTTGACTCTACTGGTGCAAGATATAACGTTACCAGGATTCTGAATAAAAACACTTTTGACATTGATATGGATAGTTATAACAAATACAGCAAGCTCCATCTTAGTATCCTATTTGCGTTAGAGTATGGATTGATCTTTGCAACTCTTGCCGCTACTCTTTCACACGTTGCCCTCTTCCATGGAAAAACAATTTGGAGGTTGTGGAAAAAGACAGCTACTTCAGTAAAAGGAGAAGTTGGTGGAGATGTGCATACAAGAATTATGAAGAAAAATTATGAACAAGTCCCTGAATGGTGGTTTGTAAGCATCTTGGTTGTGATGATTATTATGTCTTTGGCAGCTTGTGAAGGCTTTGGCAAGCAACTCCAACTGCCATGGTGGGGATTCTTACTTTCTCTAGCAATTGCATTAGTTTTCACCTTACCAGTTGGGGTCATTCAAGCAACAACAAACACGCAAATAGGGCTCAACGTGATCACAGAGTTAATAATTGGGTACATATACCCAGGAAGACCCCTTGCTAATGTAGCATTCAAGACTTATGGCTACATTAGCATGTCACAGGCACTTGGATTTCTTGGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCAAAATCTATGTTCGTTACACAGTTGGTAGGCACATTAGTTGCTTCAAGTGTGTACTTTGGCACAGCATGGTGGCTTCTGGCATCTATTAAGAACATTTGTGATGAAACATTGCTGCCAGAAGGGAGTCCATGGACATGCCCTAGTGATGTTGTGTTTTATAATGCTTCAATCATATGGGGAGTAGTAGGGCCGAAAAGAATGTTCACCAAGGATGGTTCTTACCCTGAGTTGAATTGGTTCTTCCTCTTTGGACTACTTGCACCATTTATAGTGTGGTTACTTTTGCGCAAATTTCCTAATCAAAGGTGGATTGAAGCCATCAACATACCAATTATCCTTACAGGTGCTGGTGGCATCCCTCCAATAAGATCAGTGAACTATATCATGTGGGGAGTAGTTGGAATCTTCTTCAATTTCTATGTGTATAGGAAGTTTAAGGTTTGGTGGGCTAGGCATACTTACATCCTCTCAGCTGGTTTAGATGCTGGGATAGCTTTCACTGGTATCTTGCTCTATTTTGCACTCCAAAACTATGATGTTTATGGTCCTCAATGGTGGGGTCTTGATGCCGATGATCACTGCCCATTAGCCAAATGCCCTACAGCTCCTGGTGTAGTTGCCCGTGGATGCCCGGTTCTATGA 2265 0.4216 MYGGVEDVPEDKHESKVRMIGVIDESNEINDSPVEQVRLTVPITDDPTVPALTFRTWFLGIGSCILLSFVNQFFGFRTNPLYLSSVSAQIVTLPLGKLMAATLPSRRFQLPLTEWSFTLNPGPFSLKEHALITIFASSGSSGVYAINIITIVKAFYHRDIHPAAGYMLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKERRPKGGTTRLQFFFMVFVSSFAYYIIPGYFFQTITTISSVCLIWKKSITAHQVGSGLYGLGIGSFSLDWNTVSGFLGSPLAVPGFAIINILAGFVMLIYVVIPLCYWNNVYDAKKFPLISSNTFDSTGARYNVTRILNKNTFDIDMDSYNKYSKLHLSILFALEYGLIFATLAATLSHVALFHGKTIWRLWKKTATSVKGEVGGDVHTRIMKKNYEQVPEWWFVSILVVMIIMSLAACEGFGKQLQLPWWGFLLSLAIALVFTLPVGVIQATTNTQIGLNVITELIIGYIYPGRPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFVTQLVGTLVASSVYFGTAWWLLASIKNICDETLLPEGSPWTCPSDVVFYNASIIWGVVGPKRMFTKDGSYPELNWFFLFGLLAPFIVWLLLRKFPNQRWIEAINIPIILTGAGGIPPIRSVNYIMWGVVGIFFNFYVYRKFKVWWARHTYILSAGLDAGIAFTGILLYFALQNYDVYGPQWWGLDADDHCPLAKCPTAPGVVARGCPVL* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0030 754 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 26 754 - -
Lan11g0030 754 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 30 720 IPR004648 GO:0055085
Lan11g0030 754 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 36 717 IPR004813 GO:0035673
Lan11g0030 754 PANTHER ISP4 LIKE PROTEIN 26 754 IPR004648 GO:0055085
Lan11g0030 754 Pfam OPT oligopeptide transporter protein 52 715 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0030 Lan-Chr11 205653 209759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0030 10 754 Organic Solute Cotransporters AT5G55930 66.040 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0030 - - gmx:100776230 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1365 2 24321990 24326368 Lan11g0030 11 205653 209759 LSH