Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1089 ATGCAAATGGTTTTTGGAGATAAGCTATGTCGTTTTGACTCTTTTCTTGGGTCTCCTGTGTCGTTTCCAAGTACCCATGTCTTCATACACAAAACCCACAAGTTTGGTTTAATATCAATGTCTTTTAAGCGTAGTCCTAAGCGTCTCAAATACACTGCTCCACGCTTCATCAAGGAAGATGGTTTGGTGTACATTGAAGCTGATCCATCTGGGTCTGACTCTTGGAAATTGGAACCTGTTATCAATCTATTGAAAGAAGGGGCTGTTGGAGTCATCCCTACAGATACCTTATATGCAATAGCATGTGACCTGAGAAACCAATCAGCCATTGAACGTCTTCGTAGAATCAAGAATATAGAAGTTTCAAAGCCTCTTAGCATCTTATGCCACTCATTTCGGGACATAGACAAGTATACAGCTGGATTCCCACGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGTTGTTAAGCAATGTATACCTGGCCCTTACACTTTTATCTTAATGGCAAGCAAAGAATTACCTAAGCAGTGCATAAGGTTTGGGACTAATGCTGCCAAATATGCATCAAGAAAAAATGTCGGTGTTCGTATGCCTGACGATGCCATTTGTCGAGCAATATTGAAGGAGATGGATGCACCATTAATATGTACAAGCATCAAGTTTCTGAAGGAAGATGAGTGGATGATTGATCCAGTTATGATTGCCGACACCTACGGACCAGAGGGCCTTGATTTTGTTGTTGCTGGTGGAGTAAGAGTTGCCGAACCGTCCACAGTGGTTGACATGACGAAAATGCCTCCAAGAGTTCTTCGGCAAGGAAAGGGTCCTATTTTACCTTGGATGGTGTGGGAAGAAGACCAGAAAACTGATGTCGAAGAAGATCAAATTCCGGCTGCAATTTGA 909 0.4224 MQMVFGDKLCRFDSFLGSPVSFPSTHVFIHKTHKFGLISMSFKRSPKRLKYTAPRFIKEDGLVYIEADPSGSDSWKLEPVINLLKEGAVGVIPTDTLYAIACDLRNQSAIERLRRIKNIEVSKPLSILCHSFRDIDKYTAGFPRGDGQGHANLFKVVKQCIPGPYTFILMASKELPKQCIRFGTNAAKYASRKNVGVRMPDDAICRAILKEMDAPLICTSIKFLKEDEWMIDPVMIADTYGPEGLDFVVAGGVRVAEPSTVVDMTKMPPRVLRQGKGPILPWMVWEEDQKTDVEEDQIPAAI* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1089 302 Pfam Telomere recombination 83 275 IPR006070 GO:0003725
Lan10g1089 302 Gene3D DHBP synthase 63 283 - -
Lan10g1089 302 SUPERFAMILY YrdC/RibB 65 278 IPR017945 -
Lan10g1089 302 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 31 295 - -
Lan10g1089 302 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 76 277 IPR006070 GO:0003725
Lan10g1089 302 ProSiteProfiles YrdC-like domain profile. 74 277 IPR006070 GO:0003725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1089 Lan-Chr10 16066051 16071741 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1089 - - adu:107494786 510.76