Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0971 ATGAGACGCACTCCTCCGCCGCCAATCCACTTCCTCACCACCGCCGCCACCGACAACTCCGCCGCAAGTGCCACCTCCTCCATCATGTCTTCTTATCCACGTCAACGAGGACGCGGTGGAAGATTCTCCGGCCGTTCATTTTCCAGCGGCAGAGGCCAATTCGTAACCGGCGATTCTCACTTCCGCTCGGTTCGCGACGATAATTTAGGTTACCGGCGAGGAGAGAAAGGAAACTTCGTCAATCAAACGCAACCTTATTACCCGAACCAGACTTTTTATCCGAGACCTCAACCACCACTGCCGCCGCCGCCTTATCAACAAAACTCTCAGTTCCGGCATCCTTATCCACCGCATCGTCCGCCTCCGGCGATTGGTCAGCAATTCCATCCTCGACAAAAGGCTCCGGATCATAGAGAGTGGGAGGCTGCAAAGACGCCACCACCTCCTCCTCATTGTGAACGGTTTAAAGTTCTTTCCTATAATATATTGGCTGATTACCTTGCTTGGGACCACCGGAGAACACTTTACTTTCACATACCCCAACACATGTTGGACTGGCAGTGGAGAAAGAGAAGTATACTTTTTGAGCTTGGATGGTGGTCTGCTGATATCATGTGCTTTCAGGAGGTTGATAGATTTCATGACTTGGCAGAGGAGTTGAAGCTAAAGGGTTACACTGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGCTGTGCAATCTTTTGGCAGATATCGAGGTTCAAGTTGTTATATGAAGAATCCGTTGAGTTTAATAAGCTGGGACTTAGAGATAATGTTGCTCAAATATGCGTACTAGAGTTCATTAATCAAAATGGATCTGTCCCATCAAGCTTGACAGGTTATAGTAAAATTGTGGTTTGTAACATTCATGTGCTTTACAATCCAAAAAGAGGAGAAATTAAACTTGGCCAGGTCAGAGTGCTACTCAATAGGGCTAATGCTGTTTCTAAACTCTGGAATAATGCCCCTGTTGTTATCTGTGGGGACTTTAACTGTACCCCTAAGAGTCCACTGTACAACTTCATCTCAGAACAGAAGTTAGATTTGTCTGGAATAGAAAGGGATAAGCTATCAGGACAAGCTTCTGCTAAAATTCGTTCACCGCCAAGGCTTGAAAGATTTTCTGGTGGTTCAGCTCAGGCTGTATCTATTGAAGGTGACAAGGAAGTTAATGTAGAACAAAATAATTCTTTGTCAGACATGCAGAATCCTGGTACTAAGTGTAACAGTTCAGAGAATCAATATGCTCGCACTGTTCTGGATGTGTCTAAATTGTCTCTGACAAATGTGCAGCATGGAAAGGAGAATGTCGCATATGCAGGAAAGGATACTCAGGAGCCTGCTATTGAACATTTGAAGGAAGAGCAAGATCCTTCTTATGGTGAAGCTAGGCTCCCTGTTGATAGTATAAATGCTGAGATTCATGACATCACAGTTACTACCTCTTCAGATACTGTCGCAGCTTTAAATCAAGAATCATTAAGCAAAGAATCCAACCTACATGTCCCTGAAGGAAGTAAACATATGGAGATTAATTTTCCCCCAACCTCTCTCCAAGAAGACAATCAATCTTCCAAGGTCAAGATAGGTCTTGAGTCAACAGATCTTCTCAATTTAGAAATCTCTATAACTAAACCATCCAGCGAGACTTCAGTCTCCGATGTTAATGACCAAAGGAACAGCCCATCAACCTCGGATCTTATTGGCAAATCACATCAATCCACCAACATTGACTTTCCACTAGATGAAAAGCTAGAGAAATCATTCCTTGATGAGGTAGATAAAGCCATAATAGGCAGCGAAAATACTGGCGAAGATGACAACGCTTTCATATCTTCCTTACATAATGCTGAAGAAGGCGTAACTCTTGATCCTGGCCCGTCCATTAAGTCAGATATTGGAAACACATTTCAGTTTGATGAATCAGATTCTGCCTCCAACAAGTTGTTGCTGGCTGAAGAAAGCAATGAAGTGGAGGATGGTTTATCTCCTAGTCCGAGTTCCAAATCAATTGATGCAGAGAACACTCCTTATAATCCATCCTTGTGGACCCCTATGGAGATAGAAACCGCAACAGGAAATGTAGACTGTACCTTCTTGGAGCACCAATTACCACTTAGGAGCACATATACTGAAGCCATGGATTGTTCAGGGACTAGAGACCCCCATGGTGAGCCCCTAGTGACCAGTTATAATAGGTGCTTCTTGGGAACTGTTGACTACATTTGGCGATCTGAAGGTTTGCAAACAACCCGAGTTCTTGCTCCGATACCTAAACATGCCATGGATTGGACTCCAGGATTCCCAACAAAGAAATGGGGTAGTGATCATATTGCTCTAGTTTCTGAGTTGGCATTATTGAAAGATGGCATAGACATCAACAAGGATGTTCAATAG 2424 0.441 MRRTPPPPIHFLTTAATDNSAASATSSIMSSYPRQRGRGGRFSGRSFSSGRGQFVTGDSHFRSVRDDNLGYRRGEKGNFVNQTQPYYPNQTFYPRPQPPLPPPPYQQNSQFRHPYPPHRPPPAIGQQFHPRQKAPDHREWEAAKTPPPPPHCERFKVLSYNILADYLAWDHRRTLYFHIPQHMLDWQWRKRSILFELGWWSADIMCFQEVDRFHDLAEELKLKGYTGIWKMRTGNPVDGCAIFWQISRFKLLYEESVEFNKLGLRDNVAQICVLEFINQNGSVPSSLTGYSKIVVCNIHVLYNPKRGEIKLGQVRVLLNRANAVSKLWNNAPVVICGDFNCTPKSPLYNFISEQKLDLSGIERDKLSGQASAKIRSPPRLERFSGGSAQAVSIEGDKEVNVEQNNSLSDMQNPGTKCNSSENQYARTVLDVSKLSLTNVQHGKENVAYAGKDTQEPAIEHLKEEQDPSYGEARLPVDSINAEIHDITVTTSSDTVAALNQESLSKESNLHVPEGSKHMEINFPPTSLQEDNQSSKVKIGLESTDLLNLEISITKPSSETSVSDVNDQRNSPSTSDLIGKSHQSTNIDFPLDEKLEKSFLDEVDKAIIGSENTGEDDNAFISSLHNAEEGVTLDPGPSIKSDIGNTFQFDESDSASNKLLLAEESNEVEDGLSPSPSSKSIDAENTPYNPSLWTPMEIETATGNVDCTFLEHQLPLRSTYTEAMDCSGTRDPHGEPLVTSYNRCFLGTVDYIWRSEGLQTTRVLAPIPKHAMDWTPGFPTKKWGSDHIALVSELALLKDGIDINKDVQ* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0971 807 MobiDBLite consensus disorder prediction 1 147 - -
Lan10g0971 807 MobiDBLite consensus disorder prediction 663 689 - -
Lan10g0971 807 Gene3D Endonuclease/exonuclease/phosphatase 651 804 IPR036691 -
Lan10g0971 807 Gene3D Endonuclease/exonuclease/phosphatase 126 442 IPR036691 -
Lan10g0971 807 MobiDBLite consensus disorder prediction 555 583 - -
Lan10g0971 807 MobiDBLite consensus disorder prediction 13 33 - -
Lan10g0971 807 MobiDBLite consensus disorder prediction 91 124 - -
Lan10g0971 807 MobiDBLite consensus disorder prediction 669 689 - -
Lan10g0971 807 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 43 796 - -
Lan10g0971 807 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 43 796 - -
Lan10g0971 807 Pfam Endonuclease/Exonuclease/phosphatase family 159 358 IPR005135 GO:0003824
Lan10g0971 807 SUPERFAMILY DNase I-like 147 359 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0971 Lan-Chr10 14685033 14694509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0971 219 354 EF-hand Containing Proteins AT1G02270 26.389 7.98e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0971 - - lang:109358231 1588.16