Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0909 ATGGAGAACATTGCAAAGGATTCATCTCCACACAGCATCAATTCTATAAAGCACTTGGTACCTGAAAAACAACCTCATCGTACTTGGTACCATTTTCAGCCACCACATAATTGGATGAACGATCCAAATGGACCCATGTATTACAAAGGAGTTTACCACTTTTTCTATCAACATAACCCATTTGGGCCAACCTTTGGTAAAACAATGGTATGGGCTCACTCAGTATCATATGATCTGATCAATTGGATTCATCTGAATCATGCTCTTGAGCCAACTGAGCCATATGATATTAATGGTTGCTATTCTGGCTCAGTCACAATCCTCCATGGAGAAAAGCCTGTTATTTTATATACAGGGTATGATAACAACAAAAACCAAGTTCAGAACTTAGCCATGCCCAAAAATCTATCAGACCCTTACTTAAGGGAATGGGTCAAACACCCTCAAAACCCTGTCATGGTTGCACCTAGTGGAGTTGAAATGGATAGTTTTAGAGACCCAACAACAGCTTGGAAGGGAAATGATGGTAAATGGAGAGTAATAATTGGTGCTAAAAATGGTGATGAAGGAAAAGTTATTCTATGCCATAGTGAGGATTTTGTAAATTGGACATTAGACCCTATTCCTTTTTATACAATAGACAATTATGGAATGTGTGAATGTCCAGATTTTTTTCCTGTGTCAATTTGTGGCACAAATGGGGTGGATACTTCAGTTCAAAGTTCAAGTATTAGGCATGTTTTGAAGTTGAGCTATCAAAATGAACAACAAGAGCATTATTTTCTAGGCAAATATCAACTTGATCAGGGAAATTTTATGTCTGATACTAAATTTACTGGAACTAGTTTGGACTTGAAATTGGACTATGGAACATTTTATGCTTCCAAGACATTTTTTGACTATGCCAAGAATAGGAGGATATTGTGGGGATGGGTACAAGAAACTGACACCACACAAGATGACATTGAGAAGGGATGGGCTGGTTTACAGTCGATTCCAAGACAAGTTTGGCTTCATAAAAGTGGGAAGCAATTGATGCAGTGGCCAATTGAAGAGGTTCAAAAATTACGTGAGAATCAAGTCAGTATTCTAGGAAAGAAACTAGTTGGTGGGTCAAGTCTTCAAGTAACAGGTATCACTGCATCACAGGTTGATGTAGAAGTGTTGTTTGAGCTTCCAGAATTAGAAAGTGCAGAGTGGTTAGGTGCAAATGAAGTTGATCCTAAGCTACTTTGTAGTGAAGAATATGCATCAAGAAGTGGCACAATTGGGCCATTTGGTTTGTTAGCTTTAGCTTCAGAGGATCTCACAGAGCAAACTGCAATCTTCTTCCGAATATATAGAACTCCAAATGGATATACATGCCTGATGTGTAGTGATGAGAGCAGGTCTTCATTGCGGCAAGACCTTGATAAAAGGACATATGCAACTACCTTTGACATTGATCCCAATATCAAAACCATTTCACTTAGAATCTTGATTGACCGCTCCATTATTGAGAGTTTTGTAGATGAAGGTAGGGTTTGCGTCACCAATAGAGTTTATCCCTCCTTGGCTATAGACAAAGATGCACATCTTTATGTATTTAACAATGGAACCAAGAGTGTGCTTATCTCAAAACTAAATGCTTGGAGCATGAAGCATGCGGAGTTTGGACATGACGAAAAAATAGAAAATATAAGTCATATATAG 1692 0.383 MENIAKDSSPHSINSIKHLVPEKQPHRTWYHFQPPHNWMNDPNGPMYYKGVYHFFYQHNPFGPTFGKTMVWAHSVSYDLINWIHLNHALEPTEPYDINGCYSGSVTILHGEKPVILYTGYDNNKNQVQNLAMPKNLSDPYLREWVKHPQNPVMVAPSGVEMDSFRDPTTAWKGNDGKWRVIIGAKNGDEGKVILCHSEDFVNWTLDPIPFYTIDNYGMCECPDFFPVSICGTNGVDTSVQSSSIRHVLKLSYQNEQQEHYFLGKYQLDQGNFMSDTKFTGTSLDLKLDYGTFYASKTFFDYAKNRRILWGWVQETDTTQDDIEKGWAGLQSIPRQVWLHKSGKQLMQWPIEEVQKLRENQVSILGKKLVGGSSLQVTGITASQVDVEVLFELPELESAEWLGANEVDPKLLCSEEYASRSGTIGPFGLLALASEDLTEQTAIFFRIYRTPNGYTCLMCSDESRSSLRQDLDKRTYATTFDIDPNIKTISLRILIDRSIIESFVDEGRVCVTNRVYPSLAIDKDAHLYVFNNGTKSVLISKLNAWSMKHAEFGHDEKIENISHI* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0909 563 ProSitePatterns Glycosyl hydrolases family 32 active site. 31 44 IPR018053 GO:0004553|GO:0005975
Lan10g0909 563 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 21 555 - -
Lan10g0909 563 SMART glyco_32 31 506 IPR001362 GO:0004553|GO:0005975
Lan10g0909 563 Gene3D Glycosyl hydrolase domain; family 43 36 361 IPR023296 -
Lan10g0909 563 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 349 IPR013148 -
Lan10g0909 563 SUPERFAMILY Arabinanase/levansucrase/invertase 23 350 IPR023296 -
Lan10g0909 563 CDD GH32_Fruct1-like 37 338 - -
Lan10g0909 563 Pfam Glycosyl hydrolases family 32 C terminal 352 545 IPR013189 -
Lan10g0909 563 SUPERFAMILY Concanavalin A-like lectins/glucanases 349 548 IPR013320 -
Lan10g0909 563 Gene3D - 362 546 - -
Lan10g0909 563 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0909 Lan-Chr10 13530143 13534949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0909 46 551 Glycoside Hydrolase AT5G11920 55.664 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0909 - K01193 gmx:100806220 907.901