Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0867 ATGGTACCTATGGATACTTTGGTCAAAACACCTAACAAGCTTGGATTTTTGCACCCACTTCATGGTTATTCGGAAAAGTTGAGTAATCTAAGTTACTGTACTAAGTTGCAAAACCAGGAGCTTAGATTTGGTTCCAAGAAACCAGTAGTGAAATGGGGTAGATGTGGTGTTTTGAGAGCTAGTAGTAATGCCCTTCTAGAGCTTGTTCCAGAAATTAAGAAGGAGAATCTTGATTTTGAACTTCCTCTGTATGATTCATCAAAAGGAGCTTTGGTGGACCTTGCTGTTGTGGGTGGAGGCCCAGCGGGGCTTGCGGTTGCGCAGCAGGTTTCTGATGCAGGGCTTTCAGTTTGTGCTATTGATCCGAACCCGAGATTGATTTGGCCGAATAATTATGGTGTTTGGGTTGATGAGTTTGAAGCAATGGATTTACTTGATTGCCTCGACACCACTTGGTCTGGCGCCGTTGTCTACATTGATGAAAAAAGAAAGAAGAATCTAGATAGACCTTATGGTAGGGTCAATAGGAAGCAATTGAAGTCAAAGATGCTTCAGAAATGCATATCAAATGGTGTCAAGTTTCATCAAGCTAAAGTTATCAAGGTTATTCACGAGGATTCCAAATCTATGCTGATTTGTAATGATGGTGTAACTGTTCAGGCTACCGTGGTTCTCGATGCAACTGGCTTTTCAAGAAGCCTTGTTCAGTATGATAAACCATATAATCCAGGTTACCAAGTTGCTTATGGGATTTTGGCCGAGGTTGAAGAACACCCTTTTGACTTAGATAAAATGCTTTTTATGGACTGGAGAGATTCACATCTGGATAGTGACATGGAACTGAAGGAGAGAAATAAAAGAATACCCACCTTTCTATATGCGATGCCCTTTTCATCGACCAAGATATTTCTGGAAGAAACTTCCCTTGTTGCACGGCCGGGATTAAGTATGGGTGATATACAGGAAAGAATGGTTGCTAGGTTGAAACACATGGGCATCAAAGTGAAAAGCATCGAAGAAGACGAGCACTGTGTCATCCCCATGGGTGGCCCTCTACCGGTTCTTCCCCAAAGAGTTATTGGAATTGGTGGTACTGCTGGGATGGTGCATCCGTCAACCGGGTATATGGTTGCAAGGACACTAGCTGCAGCTCCTATTGTTGCCAATGCTATTGTGCGATGCCTTGGTTCTGATAGGGCTCTTTCAGGAGATGAATTATCTGCACAAGTGTGGAAAGATTTATGGCCCATCAAAAGGCGGCGTCAAAGAGAGTTCTTCTGTTTTGGTATGGACATCTTACTGAAGCTTGATTTACCGGGCACAAAAAGGTTTTTTGATGCATTTTTTGATCTGAAACCTCATTATTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAACTACTATTTTTTGGACTTTCTCTATTTTCTTATGCTTCTAATAGATCTAGGTTAGAGATTATGGCAAAGGGGACTGTTCCTTTGGTAGGAATGGTCAAAAACTTGATACAAGATACTGAGTAA 1527 0.4178 MVPMDTLVKTPNKLGFLHPLHGYSEKLSNLSYCTKLQNQELRFGSKKPVVKWGRCGVLRASSNALLELVPEIKKENLDFELPLYDSSKGALVDLAVVGGGPAGLAVAQQVSDAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDEKRKKNLDRPYGRVNRKQLKSKMLQKCISNGVKFHQAKVIKVIHEDSKSMLICNDGVTVQATVVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMLFMDWRDSHLDSDMELKERNKRIPTFLYAMPFSSTKIFLEETSLVARPGLSMGDIQERMVARLKHMGIKVKSIEEDEHCVIPMGGPLPVLPQRVIGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVRCLGSDRALSGDELSAQVWKDLWPIKRRRQREFFCFGMDILLKLDLPGTKRFFDAFFDLKPHYWHGFLSSRLFLPELLFFGLSLFSYASNRSRLEIMAKGTVPLVGMVKNLIQDTE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0867 508 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 508 - -
Lan10g0867 508 TIGRFAM carotene-cycl: lycopene cyclase family protein 93 488 IPR010108 GO:0016117|GO:0016705
Lan10g0867 508 Pfam Lycopene cyclase protein 93 485 - -
Lan10g0867 508 Gene3D - 90 435 IPR036188 -
Lan10g0867 508 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 508 - -
Lan10g0867 508 SUPERFAMILY FAD/NAD(P)-binding domain 92 475 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0867 Lan-Chr10 12769587 12771638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0867 K06443 - gmx:100810895 903.279