Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0850 ATGAACGGAGGTCCATCTGGTTTCACAAATGCTCCTGTGACAAGAGCTTTCATCATCGCATCAGCGCTCTTCACAATTTTCTTCGGGATCCAAGGCCGTTTCAATACTCTTGGATTGTCTTATCAGGATATTTTTGGAAAGTTTCGCTTTTGGAAGTTGATTTGGTCCATATTTTCCTTCTCATCGACACCAGAGTTGATGTTTGGTCTGTATCTTCTATATTATTTCAGGGTCTTTGAGAGGCAGATAGGTTCCAACAAATACTCGGTTTTTATTGTGTTCTCCATATTAAAGTCACTACTGTTTGAGGTCCTTGTCGTAGGGCTCTTAAAAGATCCTACAACGAAGCTAGTCACTCCTGGACCTTATGGCCTTATATTTGCTTCATTTATACCCTTTTTCTTTGACATTCCAGTTTCAACCCGGTTTCGTGTATTTAGTTTTCACTTCTCTGATAAGTCATTCGTATATCTAGCAGGACTCCAGCTTCTTTTGTCATCATGGAGGAGATCCATCATACCAGGAATATGTGGCATCCTTGCTGGTGCCTTGTACCGTTCAAATGTCTTTTATATCCGCAAAGCAAAGTTCCCAGAGTTCATTGCATCATTCTTTTCACGAATTACTTTGCCATCTATGGGGAGTCCACCTGCACCATCAACAAGAAATGTTACAGGGAATGTACCATCATATCCAGCTCGCCAAATGGAGAGAAACTACCCTGCTCCCATGCCCTCATCAGTAGAACCATCGGAGGACTCTATCACTACCCTTGTTTCTATGGGATTTGACCGGAATTCTGCCAGACAAGCACTAGTGCAGGCCAGAAATGATGTTAATGTGGCCACAAACATCCTACTAGAGGCTCAGTCCCACTGA 879 0.4266 MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKFRFWKLIWSIFSFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILKSLLFEVLVVGLLKDPTTKLVTPGPYGLIFASFIPFFFDIPVSTRFRVFSFHFSDKSFVYLAGLQLLLSSWRRSIIPGICGILAGALYRSNVFYIRKAKFPEFIASFFSRITLPSMGSPPAPSTRNVTGNVPSYPARQMERNYPAPMPSSVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0850 292 Pfam UBA/TS-N domain 251 286 IPR015940 -
Lan10g0850 292 Gene3D - 225 291 - -
Lan10g0850 292 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 249 289 IPR015940 -
Lan10g0850 292 Pfam Rhomboid family 48 186 IPR022764 GO:0004252|GO:0016021
Lan10g0850 292 SUPERFAMILY Rhomboid-like 9 191 IPR035952 -
Lan10g0850 292 Gene3D - 9 187 IPR035952 -
Lan10g0850 292 SUPERFAMILY UBA-like 244 289 IPR009060 GO:0005515
Lan10g0850 292 SMART uba_6 251 288 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0850 Lan-Chr10 12533000 12539643 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0850 K25216 - gmx:100805217 520.005