Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0787 ATGGAAGGGGATCCAAAGCAGAAACTACTAATTACAAAGGAATCATCATCAGAAGAAGAATTGACATTGGTGAAAAGGGTATGGGAAGAAAGCAAGTTGATGTGGGTAGTAGCAGCACCAGGAATATTCACAAGATTCTCCACTTTTGGAATCAATGTTATAACCCAAGCATTTGTTGGCCATATTGGTTCAAGAGAACTAGCTGCTTTTGCTCTTGTATACACTGTTCTTGTCAGATTTGTTAATGGTATTCTGTTAGGCATGGCGACCGCGTTGTCAACACTTTGTGGCCAAGCATTCGGCGCGAAAGAATATGGAATGATGGGAGTATATCTTCAAAGATCATGGATAGTTTTATTCTTAACTGCATTCATTCTTCTTCCTTTGTTCATCTTCACAAGACCAATTTTTATTTTACTAGGCCAAGATGAAAGCATAGCAGAAGTTGCAGGAACCATTTCTCTTTGGTCAATTCCTATAATGTTTGCTTTTATAGTCTCATTCACTTGCCAAACATTCTTGCAATCTCAAAGCAAGAATGTGATCATTGCTTTTTTGGCAGCATTTTCAATAATCTTCCATGTATGCCTATCATGGCTTTTGGTTATAAAGTTAAATCTTGGTCTTCCTTCTGCAATAGTTGCTACAAGTTTGGCATATTGGATTCCCAACATTGGACAACTTATATTTGTAACATGTGGTTGGTGTCATGAAACATGGAAAGGTTTCTCATTTTTAGCATTCAGAGAACTCTGGCCTGTTGTTAAGCTTTCCCTTTCAGCTGGTGCCATGTTATGTCTTGAACTATGGTACAACACAATACTGGTCCTTTTAACAGGCAACATGAAAAATGCAGAGGTTGAAATTGATGCTCTATCTATATGTTTGAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGTGTTAGAGTAGCCAATGAGCTTGGAAAAGGAAGTGCCAAAGCTGCAAAGTTCTCTATAGTTGTCACAGTCCTTACATCTTTGACCATTGGGTTCCTTCTGTTTTTATTTTTCTTATTTTTTAGGGAAAGACTTGCTTATATATTTACCTCAAATAAAGAGGTAGCAGATGCTGTTGGGGATTTGTCACCTTTGTTGTCAATCTCTATACTTCTAAACAGTGTCCAACCTGTACTATCAGGAGTTGCTATTGGAGCAGGATGGCAAAGCATTGTAGCATATGTCAACATAGGTTGTTATTATGTCGTTGGAATTCCTGTAGGAATTGTTCTTGGTAAAGTTATTGATTTACAAGTCAAGGGAATATGGATTGGCATGTTATTTGGAACATTTGTTCAAACTTTGGTGCTAACTATAATCACTTACAAAACTAATTGGGATGAGCAGGTCAACATTGCGCGAAATCGTGTTAACAGATGGTCTAAGATGGGCAATTCAGATCAAGAAACAAAAATAAATACACCAGATGATTAA 1473 0.3741 MEGDPKQKLLITKESSSEEELTLVKRVWEESKLMWVVAAPGIFTRFSTFGINVITQAFVGHIGSRELAAFALVYTVLVRFVNGILLGMATALSTLCGQAFGAKEYGMMGVYLQRSWIVLFLTAFILLPLFIFTRPIFILLGQDESIAEVAGTISLWSIPIMFAFIVSFTCQTFLQSQSKNVIIAFLAAFSIIFHVCLSWLLVIKLNLGLPSAIVATSLAYWIPNIGQLIFVTCGWCHETWKGFSFLAFRELWPVVKLSLSAGAMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVANELGKGSAKAAKFSIVVTVLTSLTIGFLLFLFFLFFRERLAYIFTSNKEVADAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYVVGIPVGIVLGKVIDLQVKGIWIGMLFGTFVQTLVLTIITYKTNWDEQVNIARNRVNRWSKMGNSDQETKINTPDD* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0787 490 Pfam MatE 263 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan10g0787 490 Pfam MatE 40 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan10g0787 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 475 - -
Lan10g0787 490 CDD MATE_eukaryotic 30 463 IPR045069 GO:0042910|GO:1990961
Lan10g0787 490 PANTHER PROTEIN DETOXIFICATION 13 475 - -
Lan10g0787 490 TIGRFAM matE: MATE efflux family protein 42 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0787 Lan-Chr10 10819102 10828047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0787 K03327 - gmx:100792122 778.859