Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0717 ATGATAGCGGGAAGAACCACAAGCGCTGTTGCTGCCATCTTCACCTCACTCCTCTTTGGTTACTTCATCTGTAATTATTATTCGAAGAAGAAATTTGTTAATAAGAAAAAGAACAACAATGGATTGGTTGATGCCATTGGTAACACCCCTTTGATTCGAATCAATAGTCTCTCTGATGCTACGGGGTGCCAAATTCTTGGCAAGTGCGAGTTTTTGAATCCTGGAGGGAGTGTCAAAGATAGGGTTGCACTCCAAATCATTCAAGAGGCTTTGGAATCTGGACAACTACGCCGGGGTGGAATTATTACTGAAGGGAGTGCTGGAAGCACGGCCATTAGCATTGCCACTGTTGCTCCTGCCTTTGGATGCAAATGCCACGTGGTTATACCGGATGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCCCTTGGGGCAACTGTTGAAAGAGTACGACCAGTTTCCATTACTCACAAAGACCATTTTGTCAATATTGCACGTAGACGGGCATCGGAAGCAAACGAATTTGCATTGAAGAATAGATCACAATTAAATGGAAAAGACACAAAACAAGCAAATGGTCACGAATCTGATGGATACAGACACAGTTCACTCTTTTCTACTGACTGTCAAGGCGGGTTTTTCGCCGATCAGTTTGAGAACTTAGCAAACTTCAGGGCTCATTATGAGGGTACAGGGCCTGAGATTTGGGAACAGACGAGTGGAAAGTTGGATGCATTTGTTGCTGCGGCAGGCACTGGTGGTACTGTGGCTGGAGTTTCCAGGTTTCTCCAGGAAAAGAATCCAAATGTCAAGTGCTTCCTTGTAGATCCTCCTGGTTCTGGTTTGTTTAACAAGGTAACAAGGGGAGTAATGTACACCAAAGAGGAGGCAGAAGGTCATAGACTTAAAAATCCATTTGACACTATAACAGAAGGAATAGGAATTAACAGGGTAACAAAGAATTTTGCAGAGGGAAAACTCGATGGTGCTTTTCGAGGCACAGATATGGAGGCTGTTGAAATGGCTAGGTTTCTTTTGAAGAACGATGGTCTCTTCCTCGGGAGTTCTTCTGCAATGAACTGTGTTGGAGCAGTTAGAGTAGCACAGTCACTTGGCCCAGGTCACACAATTGTAACCATTCTTTGTGACAGCGGAATGAGACATTTGAGCAAGTTCTATAACTCTGAATACTTGTCTCAGCTTGGCTTGACACCTAAAGCAACAGCATTAGAGTTCTTGGGCATCAAATGA 1254 0.4378 MIAGRTTSAVAAIFTSLLFGYFICNYYSKKKFVNKKKNNNGLVDAIGNTPLIRINSLSDATGCQILGKCEFLNPGGSVKDRVALQIIQEALESGQLRRGGIITEGSAGSTAISIATVAPAFGCKCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANEFALKNRSQLNGKDTKQANGHESDGYRHSSLFSTDCQGGFFADQFENLANFRAHYEGTGPEIWEQTSGKLDAFVAAAGTGGTVAGVSRFLQEKNPNVKCFLVDPPGSGLFNKVTRGVMYTKEEAEGHRLKNPFDTITEGIGINRVTKNFAEGKLDGAFRGTDMEAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSKFYNSEYLSQLGLTPKATALEFLGIK* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0717 417 PANTHER CYSTATHIONINE BETA-SYNTHASE 26 416 - -
Lan10g0717 417 MobiDBLite consensus disorder prediction 177 200 - -
Lan10g0717 417 Pfam Pyridoxal-phosphate dependent enzyme 44 384 IPR001926 -
Lan10g0717 417 CDD CBS_like 47 391 - -
Lan10g0717 417 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 68 86 IPR001216 GO:0006535
Lan10g0717 417 PANTHER CYSTEINE SYNTHASE-RELATED 26 416 - -
Lan10g0717 417 Gene3D - 76 225 IPR036052 -
Lan10g0717 417 Gene3D - 46 390 IPR036052 -
Lan10g0717 417 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 26 398 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0717 Lan-Chr10 8242812 8244918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0717 46 391 Miscellaneous Gene Families AT3G04940 29.310 4.09e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0717 K01738 - gmx:100799081 672.159