Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0716 ATGGTGATCACATTTCGCTCCCTCACTTCCCTTCTCACTCCAAAACCAAGTCTTTTCTCTCTCTTCTCCCCAAAGTTCCCACCTTTCCTCAAAACCCTTCATTTCTCTCTCCTTTCTTCACCTCCTTCATTCATGTCTGCTCCTATTTATGCTTCTTCATGCCCACTTTCCTTTAACCCAAACACCTCCCAAACCCATTATCATCACTCATGTGGATATTCCACTTTCACCAATCACGTTCCTTCATCACCCTTTTCCAAATACCACCTCAACTCATTGCACACTCACACTGTTGTAGATGAAGTTGATCATGACGTAGGTGGACACAATCTATGGCTTAAGATGCAAGATGAAGCTAGATTTGATGTCACCGTCGAACCTATCTTATCCAGTTACTACCATAGTTCCATTTTGTCACATAAATCATTGGAATCTGCTTTGGCTAATCACCTTGCTATAAGGTTGAGCAACGCAAGCCTTCCAAGTTCTACACTTTTTGATCTTTTTAAGGGAATTTTGGATGGTGATGATGAGCATAACATCATGGATGCTGTGAAGGATGATTTGAGAGCAGTGAAGGAAAGAGACCCTGCTTGTATAAGCTATGTGCATTGTTTCTTGAATTTCAAAGGGTTCGTGGCATGCCAAGCACACAGGGTAGCTCACAAGCTGTGGTTACAAGGAAGGAAGGTTTTAGCAGTTATGATTCAGAACCGGGTTTCGGAAGTTTTAGCAGTGGATATTCATCCAGGAGCCAAGATTGGAAGTGGGATTTTACTTGATCATGCAACTGGGATTGTTGTTGGAGAAACTGCTGTGATTGGAAATGATGTATCAATTTTGCATAGTGTCACATTGGGAGGGACTGGTAAGGCCACTGGGGATAGGCACCCTAAGATTGGTGATGGTGTGTTGATTGGAGCAGGAACTTGTATTTTAGGGAATATTAAGATTGGTGATGGTGCTAAAATCGGTGCTGGTTCAGTAGTGATTAAGGATGTTCCTCCAAGGACTACTGTTGTTGGGAATCCGGCTAAGTTGGTTGGAGGGAAGAACAACCCTATCAAATTGGATAAGATTCCTAGCTTCACTATGGACCATACTTCAAATATCTCTGAGTTTTATGATTATTGTGTTTAG 1140 0.4211 MVITFRSLTSLLTPKPSLFSLFSPKFPPFLKTLHFSLLSSPPSFMSAPIYASSCPLSFNPNTSQTHYHHSCGYSTFTNHVPSSPFSKYHLNSLHTHTVVDEVDHDVGGHNLWLKMQDEARFDVTVEPILSSYYHSSILSHKSLESALANHLAIRLSNASLPSSTLFDLFKGILDGDDEHNIMDAVKDDLRAVKERDPACISYVHCFLNFKGFVACQAHRVAHKLWLQGRKVLAVMIQNRVSEVLAVDIHPGAKIGSGILLDHATGIVVGETAVIGNDVSILHSVTLGGTGKATGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVIKDVPPRTTVVGNPAKLVGGKNNPIKLDKIPSFTMDHTSNISEFYDYCV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0716 379 Gene3D Hexapeptide repeat proteins 247 367 - -
Lan10g0716 379 TIGRFAM cysE: serine O-acetyltransferase 185 346 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lan10g0716 379 CDD LbH_SAT 246 344 IPR045304 -
Lan10g0716 379 Pfam Bacterial transferase hexapeptide (six repeats) 297 331 IPR001451 -
Lan10g0716 379 PANTHER SERINE ACETYLTRANSFERASE 73 379 - -
Lan10g0716 379 SUPERFAMILY Trimeric LpxA-like enzymes 111 349 IPR011004 -
Lan10g0716 379 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 306 334 IPR018357 GO:0016740
Lan10g0716 379 Pfam Serine acetyltransferase, N-terminal 111 217 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lan10g0716 379 PANTHER SERINE O-ACETYLTRANSFERASE-RELATED 73 379 - -
Lan10g0716 379 Gene3D serine acetyltransferase, domain 1 96 246 IPR042122 -
Lan10g0716 379 SMART SATase_N_2_a 111 217 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0716 Lan-Chr10 8240512 8241849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0716 111 379 Miscellaneous Gene Families AT2G17640 52.788 1.15e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0716 K00640 - gmx:100820316 464.536