Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0706 ATGGATACAAGCAGCGACCCTACGCAAGACACCTCAGACGAGCAACAAAAACGTTCCGAGATCTACACCTACGAAGCCCCATGGCACATCTACGCCATGAATTGGTCCGTCCGCCGCGACAAAAAATACCGCCTCGCCATCTCCTCCCTCCTCGAACAATACCCAAACCACGTCGAAATTGTCCAGCTGGATGATTCAACGGGTGAGATTAAATCCGACCCTAACCTCTCCTTCGAACACCCTTACCCTCCCACCAAGGCAATCTTCATCCCCGACAGGGAGTGTTCCCATCCTGACCTTCTCGCCACCTCCAGCGACTTCCTCCGTATCTGGAGGCTACCCGATCCTGACTCCGCCAGCCCGGTTCAGAAAGACCGGGTGGAGCTTAAGTCTGTACTTAATGGTAACAAAAACAGTGATTATTGTGGGCCGATTACGTCGTTTGATTGGAATGAAGCCGAGCCGAAGCGTATCGGGACGTCGAGTATTGATACGACGTGTACAATTTGGGATATTGAGAAGGAGACTGTGGACACGCAGCTTATTGCGCATGATAAGGAGGTTTATGATATTGCTTGGGGCGGTGTTGGTGTTTTTGCTTCTGTTTCTGCTGATGGTTCTGTTAGGGTTTTCGATCTTCGCGATAAGGAGCATTCTACTATCATTTATGAGAGCTCTGATCCTGATACGCCCTTGGTTCGCCTTGGATGGAACAAGCAGGATCCTAGGTACATGGCGACTATCATAATGGACAGTGCTAAGGTTGTTGTGCTTGATATTCGCTTTCCAACCCTTCCGGTGGTGGAGTTGAAGAGGCACCAGGCGAATGTGAATGCAGTTGCGTGGGCACCTCATAGTTCTTGCCATATCTGCACTGCAGGGGATGACTCACAGGCTTTGATTTGGGACCTTTCTTCAATGAGTGAGCCTGTGGAGGGTGGGTTAGACCCTATTCTTGCTTACACTGCTGGTGCAGAGATTGAACAGCTTCAGTGGTCGTCTTCCCAGCCAGACTGGGTTGCAATTGCTTTCTCCACCAAACTTCAGATTCTAAGAGTGTGA 1062 0.5019 MDTSSDPTQDTSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAISSLLEQYPNHVEIVQLDDSTGEIKSDPNLSFEHPYPPTKAIFIPDRECSHPDLLATSSDFLRIWRLPDPDSASPVQKDRVELKSVLNGNKNSDYCGPITSFDWNEAEPKRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSDPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELKRHQANVNAVAWAPHSSCHICTAGDDSQALIWDLSSMSEPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0706 353 ProSitePatterns Trp-Asp (WD) repeats signature. 290 304 IPR019775 -
Lan10g0706 353 SUPERFAMILY WD40 repeat-like 55 309 IPR036322 GO:0005515
Lan10g0706 353 SMART WD40_4 71 112 IPR001680 GO:0005515
Lan10g0706 353 SMART WD40_4 126 171 IPR001680 GO:0005515
Lan10g0706 353 SMART WD40_4 263 303 IPR001680 GO:0005515
Lan10g0706 353 SMART WD40_4 174 212 IPR001680 GO:0005515
Lan10g0706 353 ProSiteProfiles Trp-Asp (WD) repeats profile. 270 312 IPR001680 GO:0005515
Lan10g0706 353 PANTHER WD REPEAT CONTAINING PROTEIN 12 353 IPR045159 -
Lan10g0706 353 Gene3D - 9 352 IPR015943 GO:0005515
Lan10g0706 353 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 270 306 - -
Lan10g0706 353 Pfam WD domain, G-beta repeat 269 303 IPR001680 GO:0005515
Lan10g0706 353 Pfam WD domain, G-beta repeat 181 212 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0706 Lan-Chr10 7701088 7703765 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0706 K11805 - qsu:112027343 655.21