Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0311 ATGACCCCTTTCCTTTCTTCTAAGATGAGAAGTAGGTTTAAGGTGTGGCCAGATGTGAGACAACTTTGCTTTAGAAAAGGCCTTCTATATGGATTTGTGAGGTTCTTTTCTACTCCATTAAAATCATTGCATAGAACTGCTAGTCGTTCACTCCGAGTTGGCCGATTTTGCAGTGTTGTCAATATGTCTTCCTCATTGCAGATTGAATTGGTACCATGTCTGAGGGACAATTATGCATACCTTTTACATGATATGGATACAGGCACAGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTGTCATTGATGCACTGAGCAGGAAAAATCGAAATTTGACATACATTCTCAACACTCATCATCATCATGGTCACACTGGTGGAAATTCAGAGTTGAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGAAGTGACAAGGAAAGGATTCCTGACATTGATATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATATAATGGACACCCCTGGTCACACCCGAGGCCATATAAGCTTCTACTTTCCGGGATCTGGGGCAATTTTTACCGGAGACACTTTGTTCAGCTTATCCTGTGGCAAGCTCTTTGAAGGAAGCCCTGAACAGATGCTATCTTCTCTTAGGAAGATCATGTCTTTGCCAGACAATACAAGTATATACTGTGGGCATGAGTATACATTGAGTAATTTGAAGTTTGCATTGTCTATTGAACCTGGAAACAAACAACTTCAATCCTATGCTACCCATGTAGCTTATCTTCGAAATAAGGGCTTACCGACAATTCCTACTACGCTGAAGACGGAAAAGGCCTGTAATCCATTCCTTCGTACATCGAGTGCCGAAATCCGACAATCATTAAACATTGCAGCCACAACAGATGATGCAAAAACCCTGGATGTTATACGGCAAGCAAAGGATAATTTTTAG 960 0.4167 MTPFLSSKMRSRFKVWPDVRQLCFRKGLLYGFVRFFSTPLKSLHRTASRSLRVGRFCSVVNMSSSLQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHHGHTGGNSELKARYGAKVIGSGSDKERIPDIDIYLNDGDKWMFAGHEVHIMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGSPEQMLSSLRKIMSLPDNTSIYCGHEYTLSNLKFALSIEPGNKQLQSYATHVAYLRNKGLPTIPTTLKTEKACNPFLRTSSAEIRQSLNIAATTDDAKTLDVIRQAKDNF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0311 319 CDD hydroxyacylglutathione_hydrolase_MBL-fold 71 234 IPR035680 -
Lan10g0311 319 SUPERFAMILY Metallo-hydrolase/oxidoreductase 66 319 IPR036866 -
Lan10g0311 319 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 1 319 - -
Lan10g0311 319 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 69 319 IPR017782 GO:0004416|GO:0019243
Lan10g0311 319 Hamap Hydroxyacylglutathione hydrolase [gloB]. 66 319 IPR017782 GO:0004416|GO:0019243
Lan10g0311 319 SMART Lactamase_B_5a 76 234 IPR001279 -
Lan10g0311 319 PANTHER BETA LACTAMASE DOMAIN 1 319 - -
Lan10g0311 319 Gene3D - 66 319 IPR036866 -
Lan10g0311 319 Pfam Hydroxyacylglutathione hydrolase C-terminus 235 319 IPR032282 -
Lan10g0311 319 Pfam Metallo-beta-lactamase superfamily 78 234 IPR001279 -
Lan10g0311 319 PIRSF Glx 61 319 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0311 Lan-Chr10 2052589 2056415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0311 K01069 - gmx:100816314 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2164 6 32072009 32075588 Lan10g0311 10 2052589 2056415 LSH
Lan10g0311 10 2052589 2056415 Lan7g0185 7 1136331 1140163 PCT
Lan7g0185 7 1136331 1140163 Lan10g0311 10 2052589 2056415 PCT