LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan10g0139	ATGTTTTGGAAGCTCGCTTCTCTTTCTGCTACCTCTCCCGTGGAGGGAATACTAGACAAGGAGAATTTCACTCTGGAAGAGCTTCTGGATGAAGAGGAAGTGATCCAAGAATGCAAGGCCCTAAACAGTCGTCTCATCAACTTTCTGAGAGATCGAGCGCAGGTTGAGCAGTTGTTACACTACATCATTGAAGAGCCACCAGAAGACGCTGAAAGCAAACGGGCCTTCAAGTTTCCATTCATTGCCTGTGAAATTTTTACATGTGAAATTGATGTTATTTTGAAGACATTGGTGGATGAAGAAGAGCTGATGAACTTATTATTCTCCTTCTTGGAGCCTAATCGTTCTCATAGTACCTTGCTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCTTAATGATTCGAAAGACAGTGCAGCTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGGCTAGTAGGAGCTGATGACCATGTGTATCCCCATTTTATAGATGTGATGCAATGGTTGGCTGAGACTGACCTCCTTGAGATGATTGTTGATAAGCTAAGTCCATCTAGTCCTCCTGAGGTCCATGCTAATGCAGCTGAAACATTATGTACAATAACTCGAAGTGCCTCATCTACTCTAGCAATTAAACTTTCAAGCCCAAGCTTTGTTTCAAAAATTCTGGGTCATGCATTGGAAGATTCACAATCGAAGTCTAGCCTTGTGAACTCACTTTCAGTGTGTATTTCTCTGTTGGATCCCAAAAGATCTATTTCATCTCCCCTTTTTCATTCATTCCGAAGTCAACATATGTATGAGCCATCTATTCCTGTAAACCCAGAAACTATTGGTGCTATGCTTCCTAAACTTAGTGAATTGCTTAAGCTTTTGAATGTGTCATCGAATGAAAAAGTATTGCCTACAACTTATGGTGAATTAAGACCCCCACTAGGAAAGCATCGATTAAAGATTGTTGAGTTCATGGCAGTACTTCTAAAAGCTGGAAATGGAGTCGCAGAAAAAGAAATGGTCAACTCAGGAACCACACGACGAGTTATTGATCTTTTCTTTGAGTATCCATACAATAACTCATTACACCATCATGTAGAAAGTATCATAATAACATGTTTGGAGAGCAAAACGGATGTCATTGTTGATCATCTTCTTCGAGAGTGTGATTTAATTAGTCGATTTATCCAAACAGATAAACGAACTATTCTCTATGCTGATGGCAATCAGCCAACAGTACCTGCTGATGGAAAACGGGCACCACGGACTGGAAACTTGGGGCATATTACTCGAATAATTAATAGACTTGTTCACTTAGCACATAATCGCAGCGACATACTGAAATATCTTGAGGGAAATGGTCAGTGGAATGAGTGGCAAGCTATAGTTCTTCAGGAGCGTAATGTGGTTCAGAACGTTCATCGTTGGGCTTGCGGACGTCCGACTGCTTTACAAGATAGGATGAGGGATAGTGACGATGATGATCTTCATGATAGGGACTATGATGTTACAGCTTTAGCAAATAATTTGAGCCAGACTTTTAAATATAAAATTTATGGTAGTGATGATAATGAAGAGGAACGTGGTGGCCATGATCGAGATGATGAGGATGTCTACTTTGATGATGATTCTGCTCAAGTAGTCATATCATCCTTGAGACTCGGTGATGATCAAGGGAGTAACCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAAAATGGGTGATGCACCTGGGGACATGGGATCCTCAGAGATGATGGATGAGATAAACTTGAATGGTGCTGCAAATAGCGGTAACAGTAGTGACGATGAGGTAGTGGTTGGAGAGGATGAAGAATTAAATGAGAGCAAAAACACAGTGAATGGTACATCTAGCTCCAGCGTAAACTTAAGTGGATTAACCGGTAGTGATTCTACCGACGAAGGCACTTTGAACATTGTAAGTGAAAAGGCAAGCGTTTCAAATGATATGGGATTCTTCAAGTTCGAAGCACCAGACAATGAGGACTTGTTTGGGGATAGGCCTTTACCCGATTGGGTAGGATGGGGTGAACCTTCAGATATGCAAATTGCTGGCTCAAGCTTGAACCCTTTTGTGGATAAGGATGAGTCTAGTAACAATAATTCTACTAAACCTCAATCAGGAAGCCCTAATCTTAGTTCTCCTTCTACAGGGGAATCCATTCCTTCAAACAGGTCTCCAACTACTAAAGATTCGATCGATGGGGGTGGTGACATGAGTCATAAATCAGTATCAGTGCCCTCACTATTTGAAGAGGATGTTGAATTTGTAGGTGTAGAATTAGAAGGCACCGAAAAAGCTATGGAACAGGCTCTGAAAGAAGGGATAGTTGGGGAAGCAGGACCATTGAAAAGGAACATAGTCTCTAAAGTGGCAGAAAAGGAAAATTCGGAAGAGGGTGGTCCTGGAATGAAGGAATTCAATGATGCAAATTACTGGAGAGTTGACCAAGAGGTTGCTGTTCTGGAGTGA	2553	0.4132	MFWKLASLSATSPVEGILDKENFTLEELLDEEEVIQECKALNSRLINFLRDRAQVEQLLHYIIEEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVDEEELMNLLFSFLEPNRSHSTLLAGYFSKVVVCLMIRKTVQLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPHFIDVMQWLAETDLLEMIVDKLSPSSPPEVHANAAETLCTITRSASSTLAIKLSSPSFVSKILGHALEDSQSKSSLVNSLSVCISLLDPKRSISSPLFHSFRSQHMYEPSIPVNPETIGAMLPKLSELLKLLNVSSNEKVLPTTYGELRPPLGKHRLKIVEFMAVLLKAGNGVAEKEMVNSGTTRRVIDLFFEYPYNNSLHHHVESIIITCLESKTDVIVDHLLRECDLISRFIQTDKRTILYADGNQPTVPADGKRAPRTGNLGHITRIINRLVHLAHNRSDILKYLEGNGQWNEWQAIVLQERNVVQNVHRWACGRPTALQDRMRDSDDDDLHDRDYDVTALANNLSQTFKYKIYGSDDNEEERGGHDRDDEDVYFDDDSAQVVISSLRLGDDQGSNLFTNSNWFAFQDDKMGDAPGDMGSSEMMDEINLNGAANSGNSSDDEVVVGEDEELNESKNTVNGTSSSSVNLSGLTGSDSTDEGTLNIVSEKASVSNDMGFFKFEAPDNEDLFGDRPLPDWVGWGEPSDMQIAGSSLNPFVDKDESSNNNSTKPQSGSPNLSSPSTGESIPSNRSPTTKDSIDGGGDMSHKSVSVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNIVSKVAEKENSEEGGPGMKEFNDANYWRVDQEVAVLE*	851

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan10g0139	850	MobiDBLite	consensus disorder prediction	536	552	-	-
	Lan10g0139	850	Pfam	SIT4 phosphatase-associated protein	131	353	IPR007587	GO:0019903\|GO:0043666
	Lan10g0139	850	Pfam	SIT4 phosphatase-associated protein	357	489	IPR007587	GO:0019903\|GO:0043666
	Lan10g0139	850	MobiDBLite	consensus disorder prediction	702	774	-	-
	Lan10g0139	850	PANTHER	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	1	848	IPR007587	GO:0019903\|GO:0043666
	Lan10g0139	850	MobiDBLite	consensus disorder prediction	709	760	-	-
	Lan10g0139	850	MobiDBLite	consensus disorder prediction	536	555	-	-
	Lan10g0139	850	PANTHER	SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 3-LIKE ISOFORM X1	1	848	-	-
	Lan10g0139	850	MobiDBLite	consensus disorder prediction	637	662	-	-
	Lan10g0139	850	MobiDBLite	consensus disorder prediction	611	662	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan10g0139	Lan-Chr10	864496	873455	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan10g0139	K15501		-	gmx:100802276	1354.35

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan10g0139	10	864496	873455	Lan3g0083	3	558680	568231	LSH
	Lan10g0139	10	864496	873455	Lan7g0304	7	1964204	1974274	PCT
	Lan10g0139	10	864496	873455	Lan8g1663	8	23594734	23605245	PCT
	Lan10g0139	10	864496	873455	Lan13g0382	13	2576738	2586374	PCT
	Lan7g0304	7	1964204	1974274	Lan10g0139	10	864496	873455	PCT
	Lan8g1663	8	23594734	23605245	Lan10g0139	10	864496	873455	PCT
	Lan13g0382	13	2576738	2586374	Lan10g0139	10	864496	873455	PCT