Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0063 ATGGCCCAACACCAATCAACCACCGATCCCTTCCTCCTAAATTATCAACCTTCCGAACTCCGAATCGCCTCCGAATTCTTATCCACATGGCTTCCTTTCCTCACACGAGATCTCTGCCACCGTTGCACTCAATCACTCTCTCATCGCATCCGTTCTATTCACCCAGCAGAGTCTCAAAATGATGATGATTCCAATGGTCTAAACTCTAATAATGTGCAATCACAAGAAATAAGTGATAATGTTGATGACGATAACTGTGATACGCATTCACTTGGGAGTTGGAAGGATGGGGCAGAGGGAAATGCTTTTATCGAGACTCCAAGTCCACGCATGTCATGGGCTGACATGGCTCAAGAAGATGATGAATTTGGTGAAGAAGAGCACGAGTCAAACAATAACAATGTGGTTGTGGCTGATTCAAATCCTTCAGATGCAACCAAAGCTGTTACTGAGAAACCTACGTTGCCTAGAGAGCAGAGAGAGTACATTAGGTTCATGAGTGTGAAGCGGAAGAAAGAGTACTTGTGTTTTGAGAGGGTTAATGGAAAACTAGTGAATATCCTTGAAGGTCTTGAACTACACACTGGTGTTTTTAGTGCTGCTGAACAGAGAAGGATAGTTAGTTATGTTGCTGAACTGCAGGAGATGGGAAGAAAGGGAGAATTGAAAGATCGGACATACTCGGCTCCTCAAAAGTGGATGAGGGGCAAGGGACGCCAAACTATCCAATTTGGGTGCTGTTACAATTACGCAGTGGATAGAGATGGTAACCCACCCGGCATTCTTCAGAGAGCAATGGTAGATCCTATACCTGATCTTTTCAAAGTCATCATACGGCGCCTGGTCAGGTGGCATGTACTCCCTCCCACTTGTGTTCCAGATAGTTGCATTGTTAATGTCTATGAAGAAGGCGACTGTATACCTCCACACATAGATAACCATGATTTCGTTCGACCATTTTGCACCGTCTCATTTCTTAGTGAGTGCAATATAGTTTTTGGATCTAATCTAAAGATTATAGGTCCTGGTGAGTTTGATGGTCCAATTGCTATTCCCCTACCTGTAGGATCTGTTCTTGTCTTGAATGGAAATGGCGCCGATGTAGCCAAGCATTGTGTACCTGCAGTTCCTATGAAGAGGATATCAATAACATTTAGAAGAATGGATGAATCTAAGCGGCCTATCAACTATGTTCCGGAACCTGATCTTCAGGGGATCCAACCATTAGTCTATGAAGTTGAAAAGGAAAAGAGGTCAACTGGACCGAGACATAATCGCGCTACGAAGAGTCATAGAGATAGGAGAGGTGGCAGGATTGATGCAGTGGGACCTGCAACTAGAAGTGATAGATTCTTCGATCCTCGCGACTCGAGACAAAGTTCACAAAGACCTGCAAATAGGTGGAGTAGGGTAAGGCCTGGTGGTTGA 1428 0.444 MAQHQSTTDPFLLNYQPSELRIASEFLSTWLPFLTRDLCHRCTQSLSHRIRSIHPAESQNDDDSNGLNSNNVQSQEISDNVDDDNCDTHSLGSWKDGAEGNAFIETPSPRMSWADMAQEDDEFGEEEHESNNNNVVVADSNPSDATKAVTEKPTLPREQREYIRFMSVKRKKEYLCFERVNGKLVNILEGLELHTGVFSAAEQRRIVSYVAELQEMGRKGELKDRTYSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILQRAMVDPIPDLFKVIIRRLVRWHVLPPTCVPDSCIVNVYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIIGPGEFDGPIAIPLPVGSVLVLNGNGADVAKHCVPAVPMKRISITFRRMDESKRPINYVPEPDLQGIQPLVYEVEKEKRSTGPRHNRATKSHRDRRGGRIDAVGPATRSDRFFDPRDSRQSSQRPANRWSRVRPGG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0063 475 MobiDBLite consensus disorder prediction 55 79 - -
Lan10g0063 475 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 292 389 IPR005123 -
Lan10g0063 475 MobiDBLite consensus disorder prediction 55 153 - -
Lan10g0063 475 Gene3D - 174 396 IPR037151 -
Lan10g0063 475 SUPERFAMILY Clavaminate synthase-like 187 388 - -
Lan10g0063 475 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 3 98 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lan10g0063 475 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 101 469 IPR044842 GO:0003729|GO:0006402|GO:0032451
Lan10g0063 475 MobiDBLite consensus disorder prediction 414 475 - -
Lan10g0063 475 Pfam 2OG-Fe(II) oxygenase superfamily 191 386 IPR027450 -
Lan10g0063 475 MobiDBLite consensus disorder prediction 130 148 - -
Lan10g0063 475 PANTHER RNA DEMETHYLASE ALKBH9B 101 469 - -
Lan10g0063 475 PANTHER RNA DEMETHYLASE ALKBH9B 3 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0063 Lan-Chr10 355271 359013 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0063 K10767 - gmx:100797674 692.575