Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0061 ATGAGCTTATTCAAGACAGGATCCCAAACAGACACAAAGCTTAACTCCACAAGCAAGGCAACCACTTTGAATCCGAATGCAGCAGAATTTGTTCCTTTTGCCCTCAGATCATCTCCGTCAGGAAGTACTGGCTTAGTAGATGTAGCTTCTAGTCTCACTACTTCTGAATCCCTTGGGAAAGCAGTTTTAGATCGATCAGGGTCGTCCGTTCCAGATAATTCTGATGATGAGGCTCACCATTACTGGCAGTGTCAGCTCCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAAGATGAGTCCCAAGGTCTTACCAACCTCTCTTTGGTGGGCTTATCCATACACGATGATGATAATGAATCTTCAAGGTTTCCTTCTAAGGGAAGTAGATTCATATTAAATGAGCAGCACCTTAATGGAAATACCATTGCTGATGATAAATTTCTATTTTCGAATTCAACCCACATGGAGGAACCATCTTCAGCAAGCCTTTTGAGCCCATTAGCAAAGCCTTGGGATAAGCAAATCGGGAATACCAACCATCATGTTAGTGGTAGTCAAGAGGCACTTATTTACGATGACAACTCTAGACATGGATTCTTAAATGATATTTTGTCTGATAATGGGATTGTTAATGATGCTAGTTTGAACCCTTTGGAGTTTTTAGCTTCTCTATTCCCTGGTTTTGCATCAGAAAGCCTGGCCGAAGTTTACTTTGCCAATGGATGTGATTTGCATCTGACCATTGATATGCTCACTCAGTTAGAGCTTCAAGTTGATGGTAGCTTCAATCAGAATCTGAATTCAAAGGCTTTGTCAGCTCCTAATCTCACTCCAATGGACTTTCCAGCACTCACCTCACCAAATGCCCAAGCTACTTCTGCAAAATATGCTACGGGTAATGCCCAACAAAGTGGCAGTCCTTACCTATCATCCAGCAAAGACATGCTCATGTTCAGAACTAGCTCTTCAAATCCATCTAGAGGTGCTATCGACTTTGCTTCAGCTGTCAGGAAATTGGCTTCTCAGGATTCTGGTATATGGAAGTACGATAGAAATGGTTCTAGTGATGCATCCACTGGCTCGAGTAGGAGTTTAAATGTTTTGGCTAGTGCGTACAATGGTGGACAGGGGAGTGCAAACTTTGGTGATAGGTCACAGAACCGTGTTTCTGCTCGGACAGTTCCTATTTGGCTTGAAACCGGTGATGCAGTTGCAAATATGTATTCTGAGCTGCGGGAAGAGGCCCGTGATCATGCACGCTTGCGAAATGCATATTTTGAGCAGGCACGTCAAGCCTACCTTATCGGCAATAAGGCCCTAGCCAAAGAGCTAAGTGCTAAGGGGCAAGTACACAACATGCATATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGCCAGAGGAACCCTGTTGGGCCAGTGATGCAGGTCAATGGAAGAGGACACGAGAGGATAATAGACCTGCATGGGCTGCATGTAAGTGAAGCCCTTCACGCGCTGAAACATGAATTGAGTGTGCTAAGAAGCACTGCCAGAGCTGCCGAGCAGCGTTTACAGGTTTATATCTGCGTTGGTACTGGTCACCATACGAGAGGTTCTCGCACCCCTGCAAGACTTCCGATAGCTGTACAGCATTATCTACTCGAAGAAGAGGGCCTTGACTTCACAGAACCGCAACCGGGCCTGCTTCGTGTTGTCATACATTGA 1719 0.4508 MSLFKTGSQTDTKLNSTSKATTLNPNAAEFVPFALRSSPSGSTGLVDVASSLTTSESLGKAVLDRSGSSVPDNSDDEAHHYWQCQLPDDITPDFKVMGEDESQGLTNLSLVGLSIHDDDNESSRFPSKGSRFILNEQHLNGNTIADDKFLFSNSTHMEEPSSASLLSPLAKPWDKQIGNTNHHVSGSQEALIYDDNSRHGFLNDILSDNGIVNDASLNPLEFLASLFPGFASESLAEVYFANGCDLHLTIDMLTQLELQVDGSFNQNLNSKALSAPNLTPMDFPALTSPNAQATSAKYATGNAQQSGSPYLSSSKDMLMFRTSSSNPSRGAIDFASAVRKLASQDSGIWKYDRNGSSDASTGSSRSLNVLASAYNGGQGSANFGDRSQNRVSARTVPIWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQVHNMHMKAAHGKAQESIYRQRNPVGPVMQVNGRGHERIIDLHGLHVSEALHALKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQHYLLEEEGLDFTEPQPGLLRVVIH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0061 572 SMART DUF1771_2 409 474 IPR013899 -
Lan10g0061 572 CDD CUE_CID7_like 217 259 IPR041806 -
Lan10g0061 572 SMART SMR_2 487 572 IPR002625 -
Lan10g0061 572 MobiDBLite consensus disorder prediction 1 20 - -
Lan10g0061 572 ProSiteProfiles Smr domain profile. 490 572 IPR002625 -
Lan10g0061 572 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 571 - -
Lan10g0061 572 Gene3D - 457 572 IPR036063 -
Lan10g0061 572 Pfam Domain of unknown function (DUF1771) 410 473 IPR013899 -
Lan10g0061 572 Pfam Smr domain 490 558 IPR002625 -
Lan10g0061 572 SUPERFAMILY SMR domain-like 488 570 IPR036063 -
Lan10g0061 572 Coils Coil 501 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0061 Lan-Chr10 343315 348049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0061 - - gmx:100796128 885.945