Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0006 ATGGTAAATCCAATAGCAGTGGCAATTGTGGTGATTGTCCTAAGGTTGGCTTATAAGGCCTTAAAGCCTCCTCCTCCTAAAACATGTGGATCAGTTGGTGGTCCTCCACTCACTTCACCAAGAGTGAAACTCAGTGATGGTAGGCATTTGGCTTACCGAGAATTCGGTGTTCCAAAGCTAGAAGCTAAGTACAAGATCATTGTCATTCATGGATTTCACTCTTCCAAAGACATCAATTTGCCACTCTCTCAAGAATTTGTTGAAGATCTTGGGATATATTTCCTGTTTTTTGACAGAGCAGGGTATGGTGAAAGTGATCCACATCCATCACGTTCAGTGAAGAGTGAAGCATATGACATACAAGAACTAGCTGATAAAGTGCAAATTGGTCACAAATTTTATGTTATTGGCATATCATTGGGAGCTTATGCTGTTTGGAGCTGTCTAAAATACATTCCACAAAGGTTATGTGGAGCAGCCTTGGTGGTTCCATTTGTAAGTTATTGGTGGCCTTCTTTTCCTGCTAATATATCAAGAGAGGCCCTTCAGATGCTACCTAAGCCAGACCAATGGACATTTCGAGTTGCACATTACGCCTCTTGGTTATTCTATTGGTGGATGACTCAAAAATGGTTCCCTTCGTTAACTTTTGGAAATACTGAAACCTTATCTGCTGATGATTTAGAGATCATAAAGAGCTTTCCACAAGGACTAAATACTGCTCAGGAGAAGATAACTCAGCAAGGTGAACATGAATCATTACACAGAGACATAGTGAGTGGTTTTGGTGAGTGGGAATTTAGCCCAACTGACATATTAAATCCATTCCCTAACAAGGAAGGTTCTGTCCACATTTGGCAAGGGTATGAAGATAGGATCATTCCCTATACACTCAACCGTTTTATATCACACAAACTACCTTGGATTCATTATCACGAGCTTTCTGATGGAGGACATATGTTTATCTTCAAGAAAAAGCATTTGGAATCTATTATTACAGAACTTCTACTCTCATAA 1017 0.3982 MVNPIAVAIVVIVLRLAYKALKPPPPKTCGSVGGPPLTSPRVKLSDGRHLAYREFGVPKLEAKYKIIVIHGFHSSKDINLPLSQEFVEDLGIYFLFFDRAGYGESDPHPSRSVKSEAYDIQELADKVQIGHKFYVIGISLGAYAVWSCLKYIPQRLCGAALVVPFVSYWWPSFPANISREALQMLPKPDQWTFRVAHYASWLFYWWMTQKWFPSLTFGNTETLSADDLEIIKSFPQGLNTAQEKITQQGEHESLHRDIVSGFGEWEFSPTDILNPFPNKEGSVHIWQGYEDRIIPYTLNRFISHKLPWIHYHELSDGGHMFIFKKKHLESIITELLLS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0006 338 SUPERFAMILY alpha/beta-Hydrolases 36 323 IPR029058 -
Lan10g0006 338 Gene3D alpha/beta hydrolase 38 336 IPR029058 -
Lan10g0006 338 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 337 - -
Lan10g0006 338 Pfam Serine aminopeptidase, S33 62 186 IPR022742 -
Lan10g0006 338 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0006 Lan-Chr10 48403 50852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0006 - - gmx:100808779 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1837 6 29621723 29624873 Lan10g0006 10 48403 50852 LSH
Lan10g0006 10 48403 50852 Lan3g0144 3 963137 965976 LSH
Lan10g0006 10 48403 50852 Lan8g1602 8 22979618 22981982 PCT
Lan8g1602 8 22979618 22981982 Lan10g0006 10 48403 50852 PCT