Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0911 ATGGTTCATTCCCTTCTTCCCTCTTATTCTTCTCCTCCTCCTTTCACTATTCTTCCAACCAAATCCTTCAAACATTATCCTCTCACCACTAACCAATTTCCATGCAACTTCACCACTTTCTCTTCTTCACTTTCTAAACCTCATCCTCATGCTAATTACTCTCACACTCTCAAAAATTTGAATGCTTCTACAAATCAGCCTTTGGGATATACTCGAAATGGAGGCTGTCTTGATGCAATGAAGAATTGGATTGTGCTTCAGATGTTTCAAAGGGAAATGGCAATGGAATCCCTTATTGCAAAACAGTCTGAGGGAAATGGCTTTACAATCAATGATCATGAAGAACGGGAAATGGCAACCAGATGGGCTACAGCTTTCTTGTTTGGACAAGCTTTATCTGTGGTTTCTCCTGAAATGGCATATGCAAGTGACACAATGAAGCTGAATGAGATATATGAAGTGGGAGAATTATTTGATTTAGGGATCCAATTATTGTACTTGATATTGTTATTGGGTTTGCTAGGGGCTGGGACATACTTCGTGATTCGCCAAGTGCTTGTTCGCAGAGAACTTGACCTTTCTGCCAAAGAATTGCAGGAGCAAGTAAGAAGTGGTGATGCAAATGCGACAGGGCTTTTTGAACTCGGCGCAGTAATGCTGCGGAGAAAATTTTATCCAGCTGCTACCAAGTACTTGCTTCAGGCAATTGATAAATGGGATGGAGACGATCAGGATCTTGCCCAGGTTTATAATGCTCTTGGTGTCAGCTATGTTCGTGACGATAAGCTCGAGAAGGGGATTACGCAATTTGAGATGGCTGTAAAGCTTCAGCCAGGCTATGTCACAGCATGGAACAATCTCGGTGACGCATATGAGAAGAAGAAAGAATACAAAGCTGCACTGAAGGCATTTGAAGAAGTCCTTCTATTTGACCCGAACAACAAGATTGCTCGGCCCAGGAGAGATGCTATGAAGGAACAAGTTGAAATGTATAAAGGAGTTCCACTCAAAGCAAAAGAGAAAAGATGA 1029 0.4189 MVHSLLPSYSSPPPFTILPTKSFKHYPLTTNQFPCNFTTFSSSLSKPHPHANYSHTLKNLNASTNQPLGYTRNGGCLDAMKNWIVLQMFQREMAMESLIAKQSEGNGFTINDHEEREMATRWATAFLFGQALSVVSPEMAYASDTMKLNEIYEVGELFDLGIQLLYLILLLGLLGAGTYFVIRQVLVRRELDLSAKELQEQVRSGDANATGLFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLEKGITQFEMAVKLQPGYVTAWNNLGDAYEKKKEYKAALKAFEEVLLFDPNNKIARPRRDAMKEQVEMYKGVPLKAKEKR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0911 342 SUPERFAMILY TPR-like 208 318 IPR011990 GO:0005515
Lal9g0911 342 ProSiteProfiles TPR repeat profile. 281 314 IPR019734 GO:0005515
Lal9g0911 342 ProSiteProfiles TPR repeat profile. 247 280 IPR019734 GO:0005515
Lal9g0911 342 PANTHER TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC 62 335 - -
Lal9g0911 342 Gene3D Tetratricopeptide repeat domain 188 340 IPR011990 GO:0005515
Lal9g0911 342 SMART tpr_5 281 314 IPR019734 GO:0005515
Lal9g0911 342 SMART tpr_5 209 242 IPR019734 GO:0005515
Lal9g0911 342 SMART tpr_5 247 280 IPR019734 GO:0005515
Lal9g0911 342 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 62 335 - -
Lal9g0911 342 Pfam Tetratricopeptide repeat 220 279 - -
Lal9g0911 342 Pfam Tetratricopeptide repeat 283 314 IPR001440 GO:0005515
Lal9g0911 342 ProSiteProfiles TPR repeat region circular profile. 281 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0911 Lal-Chr9 6864606 6870315 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0911 - - ahf:112712552 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0911 9 6864606 6870315 Lal9g0911 9 6864606 6870315 ECH