Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0877 ATGAATACCTCCTTCTTGTTCACCCTTTCCTTGGTCCTCACTTCTTATGCTATTTTACCTGCATCAAGCTCAAGCTTGTTTGAACAATTATGCATAAAGGTCAAGGAAACCGGTTCAGATGAACGCCAATGCCTGCATATTCTGAATGTCCATCCCAAACTCGGTTCGGCGAAAAACTATAATGAACTCTCAAAGAACATTCTCCAGTTAGCATTGAAGAAGAGCATAGAAGCACAGAATTTCTTGAAGGAAGTGATAAAGACAAACCCATCAGCAGCACTAAGAGAATGTGCAACTATTGATTATGATGGGGTGGTTGCATCATTCAGAAGTTCTTTGAGTGAATTGAAGGAGGATACAGAGACTGCAAATTATGATGCTAAAGTTGGTGGTGATGGACCAACAACTTGTGATAGGGCATTGGCTGCAGAAAAAATAAACAATCCTGCCATTGCTGCCCTTAACAAGGATATATTATTGCTTAGTAACATTGCATTTTTGGCTACTGATATGCTTCCCTAA 522 0.3985 MNTSFLFTLSLVLTSYAILPASSSSLFEQLCIKVKETGSDERQCLHILNVHPKLGSAKNYNELSKNILQLALKKSIEAQNFLKEVIKTNPSAALRECATIDYDGVVASFRSSLSELKEDTETANYDAKVGGDGPTTCDRALAAEKINNPAIAALNKDILLLSNIAFLATDMLP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0877 173 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 172 IPR035513 -
Lal9g0877 173 PANTHER PECTINESTERASE INHIBITOR DOMAIN-CONTAINING PROTEIN-RELATED 2 172 - -
Lal9g0877 173 Pfam Plant invertase/pectin methylesterase inhibitor 29 165 IPR006501 GO:0004857
Lal9g0877 173 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 2 172 - -
Lal9g0877 173 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 172 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0877 Lal-Chr9 6582257 6582778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0877 - - gmx:102660296 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0993 2 6790422 6790934 Lal9g0877 9 6582257 6582778 LSH
Lal9g0877 9 6582257 6582778 Lal13g0075 13 500238 500780 PCT