Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0854 ATGGAGGCCAGAATCTCATCCTCTCTTGGCCTCCCTTCTCCTAAACCCCACCACCAACCTCCATCCCTAACCGACTTCACCGGACTCTTGAACCACTTCACCACCACCCTCACCCACACCAACCACCACCACCACCACACCCTCCCATTCGCTTCAACCTCCACTTCCAACCCGACCCGATTTCGACCCACTCTCACCCCGAAGATCCAAACCCTCGTGAAAAACCTCACGCTCCTCGAACGCGCCCTCATCGGTGCAGCCGGTGGCGGCATCGCGGGCGCGTTCACCTACGTTTGTCTCCTCCCTCTCGACGCAATCAAGACCAAGATGCAAACCAAAGGGGCATCCCAAATTTACAAGAATGCCCTCGATGCTGTTGTCAAAACTTTCAACTCTGAGGGCATTCTCGGTTTTTACACCGGAGTCTCAGCGGTTATTGTTGGTTCTACTGCTTCCTCTGCAGTATATTTCGGAACCTGCGAGTTTGGTAAATCTTTTCTATCGAAATTACCCAATTACCCTTCTGTTCTGATCCCACCAACTGCGGGTGCAATGGGCAATATTGTCTCATCTGCTATAATGGTACCTAAGGAGTTAATCACTCAGAGAATGCAGGCTGGTACAAAGGGAAGATCTTGGGAGGTTTTGCTGAGAATTCTAGAGAAAGATGGTGTTTTGGGTTTATATGCAGGTTACTCTGCTACATTGTTGAGGAATTTACCTGCTGGGGTGTTGAGTTATTCGTCGTTTGAATATTTAAAATCGGCGGTGTTGAGTAGTACAAAGAAGGATCATTTGGAACCGGTTCAGAGTGTGTTGTGTGGGGCATTGGCTGGTGCGATATCGGCTTCGATAACTACGCCTTTGGATGTGGTGAAGACTAGGCTGATGACACAGGTTCATGGGGAGGCTGTGAATAAGGTTGCTGCTGTTATGTATGATGGGGTTTCCGCTACGGTGAAGGTGATTTTGAAGGAGGAAGGGTGGGTTGGATTGACAAGGGGAATGGGTCCGAGAGTTCTTCATAGTGCTTGTTTTTCGGCGTTGGGGTACTTTGCTTTTGAAACTGCTAGGCTTTCTATACTGCATGAGTATCTCAGGCAGAAGGAGTTGAGTGAAGTGTCTGTTTCTACAACCTGA 1140 0.4904 MEARISSSLGLPSPKPHHQPPSLTDFTGLLNHFTTTLTHTNHHHHHTLPFASTSTSNPTRFRPTLTPKIQTLVKNLTLLERALIGAAGGGIAGAFTYVCLLPLDAIKTKMQTKGASQIYKNALDAVVKTFNSEGILGFYTGVSAVIVGSTASSAVYFGTCEFGKSFLSKLPNYPSVLIPPTAGAMGNIVSSAIMVPKELITQRMQAGTKGRSWEVLLRILEKDGVLGLYAGYSATLLRNLPAGVLSYSSFEYLKSAVLSSTKKDHLEPVQSVLCGALAGAISASITTPLDVVKTRLMTQVHGEAVNKVAAVMYDGVSATVKVILKEEGWVGLTRGMGPRVLHSACFSALGYFAFETARLSILHEYLRQKELSEVSVSTT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0854 379 MobiDBLite consensus disorder prediction 1 24 - -
Lal9g0854 379 Gene3D Mitochondrial carrier domain 211 378 IPR023395 -
Lal9g0854 379 Gene3D Mitochondrial carrier domain 31 210 IPR023395 -
Lal9g0854 379 PRINTS Mitochondrial carrier protein signature 85 98 IPR002067 GO:0055085
Lal9g0854 379 PRINTS Mitochondrial carrier protein signature 98 112 IPR002067 GO:0055085
Lal9g0854 379 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Lal9g0854 379 PRINTS Mitochondrial carrier protein signature 275 297 IPR002067 GO:0055085
Lal9g0854 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 256 IPR018108 -
Lal9g0854 379 Pfam Mitochondrial carrier protein 266 358 IPR018108 -
Lal9g0854 379 Pfam Mitochondrial carrier protein 181 257 IPR018108 -
Lal9g0854 379 Pfam Mitochondrial carrier protein 87 169 IPR018108 -
Lal9g0854 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 360 IPR018108 -
Lal9g0854 379 SUPERFAMILY Mitochondrial carrier 83 355 IPR023395 -
Lal9g0854 379 PANTHER PROTEIN MITOFERRINLIKE 1, CHLOROPLASTIC 16 374 - -
Lal9g0854 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 166 IPR018108 -
Lal9g0854 379 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 16 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0854 Lal-Chr9 6292980 6294119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0854 83 371 EF-hand Containing Proteins AT2G35800 29.630 2.56e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0854 K15111 - gmx:100805903 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0854 9 6292980 6294119 Lal9g0854 9 6292980 6294119 ECH