Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0851 ATGGAACAGAAGCACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGTCTTGGATTGAGTTCAGGTCAAAAATGGGTTGGTGGGAATGGTGACTCTGATGAGATTTCTGAGGAGCAGATTGTGATGGAACTCAAGAACCATGTGTTTGATGGGAAAGATAGCGTAGTTACATTTAATGAGTTTCCTTATTACTTAAGTGAAAGAACTCGAGTTTTGTTGTCAAGTGCTGGATATGTTCATTTGAAAAATCAACATTTTTCTAAGCACACACGGAACCTCTCACCAGCGAGCAGGGCTATTTTGCTCTCCGGTCCTACAGAACTTTACCAGCAAATGCTTGCCAAAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTATTGGTAGATATCAATGACTTTTCCTTGAAGATGCAGAACAAATATGGATGTTCTAGAAAAGAGCCATCTTTCAAAAGGTCCATATCTGAGGTGACTTTGGAGCGAATGTCTGGCTTGTTTGGTTCTTTTTCTATCCTCCCGTCAACAGGTGTAACTAGAGGGACTCTACGTCAACAAGGCAACGCTGTTGAAAGTTATAATAATCCTCACAAGCTTCACAGAAATGCTTCTGCTGCATCTGATATAAGTAGCATTGCTTCCCAGTGTGGTCCAACAAACTCAGCTCCTTTAAAGCGCACAAGCATCTTGTGTTTTGATGAAAAGCTATTTGTGCAGTCACTTTACAAGGTTCTAGTTTCTATCTCAGAAACTGGTTCCATCATTTTATACATCAGGGATGTTGAGAAGCTCATTATCCAATCACCAAGGTTATACAATTTATTACAAAAAATGATAAAGAAACTTTCAGGTTCGGTGTTAATACTCGGTTCCCAGATAATAGATTCAGATGATGATTGCAAAGAAATTGATGAAAGGCTCAGTATGCTATTCCCTTACAACATTGAGATCAAACCTCCAGAAGATGAAGCTCATCTTGGCATCTGGAAATCCCAACTGGAAAAAGACATGGAAGTTCTTCAATTTCAAGATAACAGAAACCACATTGCAGAAGTACTTGCAGAAAATGATATTCACTGTGATGACTTGACTTCAATATGCCATGCAGACACTATGATACTAAGTACTTATATTGAAGAAATTGTGGTGTCTGCAATATCTTATCATTTGATGAATGCCAAGGATCCAGAATACAGAAATGGAAAGCTAGTTATATCAGCCAACAGTTTGTCCCATGGATTGAGTCTTTTTCAGGAAGGCAAAAGTAGTGGGAATCTGAAGACCAATGAACCTATCAAGGACAATTCTGGCAATGATGTGCGGAGCGACAACCAATCACCTGAAAACAAAAATGAGACAGAGAAATCTGTCCCTGTGATGAAGAAAGATGCCGAGAGTCCTTCTCCAGCAAAATCAGAAGTTCCTGACAATGAGTTTGAAAAACGCATAAGACCAGAGGTTATCCCTGCAAATGAGATAGGTGTTACATTTGCAGATATTGGAGCATTAGATGAGATTAAAGAATCACTTCAAGAGCTGGTCATGCTTCCCCTGAGAAGACCAGATCTCTTCATAGGTGGCCTTCTAAAGCCATGCAGAGGTATATTGCTTTTTGGGCCTCCTGGTACTGGAAAAACAATGCTAGCGAAAGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCGATGTCCACCATTACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTCACTCTAGCAGCAAAAGTTGCTCCAACTATTATCTTTGTTGACGAGGTTGATAGCATGCTTGGTCAGCGGACTAGAGTTGGAGAACACGAGGCCATGCGGAAGATTAAAAATGAATTTATGACACATTGGGATGGGCTATTAACAAGACCCGGTGAGCAAATTCTGGTTCTTGCTGCAACCAACAGACCATTTGACCTTGATGAAGCAATTATAAGACGATTTGAGCGCAGGATTATGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCCTGAAAACTCTTCTAGCTAAAGAAAAACATGAAAACTTGGACTTCAAAGAACTCGCAACCATGACTGAAGGCTTTAGTGGAAGTGATCTTAAGAATTTTTGCATAACTGCGGCTTATCGACCCGTTAGAGAGCTAATACAGCAGGAGATAAGGAAGGACATGGAAAAGAAGAAAAAAGAAGCCGAAGACCAAGGCTCTGTAGATGCTTCGAGCAATGAAGAAGATAAAGAAGAACGAGAAATTATACTTAGGCCTTTGAATATGGAAGACATGAGACAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCTTCAGAAGGAGCAGTAATGAGTGAGCTGAAGCAATGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAACAACAACTCACTTACTTCCTTTAG 2439 0.4059 MEQKHVLLSALSVGVGLGVGLGLSSGQKWVGGNGDSDEISEEQIVMELKNHVFDGKDSVVTFNEFPYYLSERTRVLLSSAGYVHLKNQHFSKHTRNLSPASRAILLSGPTELYQQMLAKALAHCFESKLLLVDINDFSLKMQNKYGCSRKEPSFKRSISEVTLERMSGLFGSFSILPSTGVTRGTLRQQGNAVESYNNPHKLHRNASAASDISSIASQCGPTNSAPLKRTSILCFDEKLFVQSLYKVLVSISETGSIILYIRDVEKLIIQSPRLYNLLQKMIKKLSGSVLILGSQIIDSDDDCKEIDERLSMLFPYNIEIKPPEDEAHLGIWKSQLEKDMEVLQFQDNRNHIAEVLAENDIHCDDLTSICHADTMILSTYIEEIVVSAISYHLMNAKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNEPIKDNSGNDVRSDNQSPENKNETEKSVPVMKKDAESPSPAKSEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFIGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKHENLDFKELATMTEGFSGSDLKNFCITAAYRPVRELIQQEIRKDMEKKKKEAEDQGSVDASSNEEDKEEREIILRPLNMEDMRQAKSQVAASFASEGAVMSELKQWNDLYGEGGSRKKQQLTYFL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0851 812 MobiDBLite consensus disorder prediction 423 447 - -
Lal9g0851 812 Pfam ATPase family associated with various cellular activities (AAA) 538 668 IPR003959 GO:0005524|GO:0016887
Lal9g0851 812 MobiDBLite consensus disorder prediction 448 483 - -
Lal9g0851 812 Pfam AAA+ lid domain 690 733 IPR041569 -
Lal9g0851 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 356 IPR027417 -
Lal9g0851 812 Gene3D - 497 669 IPR027417 -
Lal9g0851 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 498 737 IPR027417 -
Lal9g0851 812 SMART AAA_5 534 671 IPR003593 -
Lal9g0851 812 CDD AAA 536 669 - -
Lal9g0851 812 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 812 - -
Lal9g0851 812 MobiDBLite consensus disorder prediction 734 758 - -
Lal9g0851 812 ProSitePatterns AAA-protein family signature. 641 660 IPR003960 GO:0005524|GO:0016887
Lal9g0851 812 Gene3D - 670 741 - -
Lal9g0851 812 MobiDBLite consensus disorder prediction 423 483 - -
Lal9g0851 812 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0851 Lal-Chr9 6255110 6263473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0851 498 727 Calmodulin-binding Proteins AT3G56690 39.316 9.56e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0851 - - gmx:100817952 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0851 9 6255110 6263473 Lal9g0851 9 6255110 6263473 ECH
Lal2g0962 2 6449429 6455211 Lal9g0851 9 6255110 6263473 LSH