Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0842 ATGCAATTCTTCGGGGGGTCTGAGATCAGCCCATCACCACCTGTGCCAGCAGCTTCTGGAAACAATGGCCATATGATGTATGTGTTCAATAGGAATGGCATATGTTTGCTCTATAGGGAGTGGAATCGCCCGCTCAGGACGTTGAATGCCCAACAAGACCACAAGTTAATGTTTGGTCTACTTTTCTCGCTTAAGTCGTTAACTGGCAAGATGGACCCCACTAGTGCTGAGAAAGGAAACCTTGGCGTGCCTCAGTTACCTGGCCAAGGTTGTTCATTTCACAGTTTTCGCACTAATACATACAAGCTTAGTTTCATGGAAAGTCCTTCTGGGATAAAGATTATCTTGGTCACTCATCCTAGAACTGGTGACTTACGGGAATCCTTGAAGTATATATACAACTTGTATGTTGAATATGTTGTCAAGAATCCACTCTATACACCTGGATCTCCTATTAGGTCTGAGCTGTTCAATACAACATTGGACCAGTATGTCAGAGGGATTGCATAA 510 0.4373 MQFFGGSEISPSPPVPAASGNNGHMMYVFNRNGICLLYREWNRPLRTLNAQQDHKLMFGLLFSLKSLTGKMDPTSAEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVVKNPLYTPGSPIRSELFNTTLDQYVRGIA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0842 169 Gene3D - 24 169 - -
Lal9g0842 169 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 168 IPR007233 GO:0016192|GO:0030008
Lal9g0842 169 CDD TRAPPC1_MUM2 24 164 - -
Lal9g0842 169 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1-LIKE 1 168 - -
Lal9g0842 169 SUPERFAMILY SNARE-like 24 167 IPR011012 -
Lal9g0842 169 Pfam Sybindin-like family 24 166 IPR007233 GO:0016192|GO:0030008
Lal9g0842 169 SMART Sybindin_2 23 168 IPR007233 GO:0016192|GO:0030008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0842 Lal-Chr9 6146108 6155134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0842 K20300 - csin:114295032 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0842 9 6146108 6155134 Lal9g0842 9 6146108 6155134 ECH