Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0830 ATGAGTTCATACTTTGAGGAAAAGGTTCCTTGTTGTGAACCTCATTTTTGGGTTATACTAACCTTAAGTTCAGGTTTTGTGTTATTTGCTGCTACCACTTCAGGTCTTGCTTTATCACTCATGTCTTTCAGCCATGTTGATCTTGAGGTTCTTGTTAAAGCTGGCCAACCTCATATCCGGAAACATGCAGGGAGGATTATGTCCATAGTTAAGAATGAGCATTTACTTCTATGTACCCTCCTCTTGGCTAAATCAATAGCAATGGAGGGGGTTTCTGTTTTGATGGAGAAAATGTTCCCAGAGTGGGTGGCTGTACTTATATCAGCTACACTTTTAGGTATCATCGCCGAGGTCATCCCTCAAGCCTTGTGTTCTCGATACGGATTACGTGTTGGTGCGACGATGGCTCCTTTTGTTCGAGTACTTATGCTGATTTTCTGCCCCATTGCATATCCAATCAGTAAGTTGTTGGATTGGCTACTTGGCAAGGGGGAAACTGCACTTTTAGGACGAGCGGAGTTGAAGACTTTAATCAATATTCACGCGAAGGAGTCAGGGAAAGGTGGAGAATTGACACTCCATGAAACAAGAATAATTGCTGGAGCTTTGGACTTAACACAGAAAACAGCAAAAGATGCTATGACACCAATAAGTGAAACATTTTCTCTCAACATAAACTCCAAACTTGACATGCATACAATGGGGTCGATAATGAGCAAAGGTCACAGCCGAATACCGATCTACTCCGGAATACCAACAAATATCGTCGGACTTATCTTGGTCAAGAATTTGATCTTCTGCCGTCCCGAAGATGAAACACCAATTAAGCATTTGACTATAAGGAGAGTGCCTAGAGTTAGCGAAAATTGGCCTTTATATGATATCCTGAATCAATTCCAGAAGGGTCAATGTCACATGGCTGTTGTTGTCAAGTGTGAAGAGAATATCAAAACAGCTGAAACTAATGCACAAGGCAAGACTCTCAGACTTTGTTCTTCGATTGAACCGCGAGAGTATATTAGTATCTCCACTGATGCATCAACTCATCAGTCATATGAAACAGAATATTATAGTGCAACACTGAAGAATGTCATGCTAGAAAAGGGTGACTCAGATCCACTATATAGAAGATCGGAACAACCCGATTCAAGTACATCATTTGCAAATTCTCTTCTAATCAATGAAGAAGTGATTGGGATAATAACATTGGAAGATGTTATGGAAGAGATACTTCAGGAAGATATATTGGATGAAACAGATGAATATGTTGATGTCCATAAAAATATCACAATCAAACTGCAACATCCAAGAAGAGGGGCATCAAGGTCCTCTAGAAGGACTTCAACTTCATCTCGAGTTCATAATTTCTCTCCTACATCTATTGCACCCATTTCTCCCTCTAACCAGAGCTGA 1413 0.4048 MSSYFEEKVPCCEPHFWVILTLSSGFVLFAATTSGLALSLMSFSHVDLEVLVKAGQPHIRKHAGRIMSIVKNEHLLLCTLLLAKSIAMEGVSVLMEKMFPEWVAVLISATLLGIIAEVIPQALCSRYGLRVGATMAPFVRVLMLIFCPIAYPISKLLDWLLGKGETALLGRAELKTLINIHAKESGKGGELTLHETRIIAGALDLTQKTAKDAMTPISETFSLNINSKLDMHTMGSIMSKGHSRIPIYSGIPTNIVGLILVKNLIFCRPEDETPIKHLTIRRVPRVSENWPLYDILNQFQKGQCHMAVVVKCEENIKTAETNAQGKTLRLCSSIEPREYISISTDASTHQSYETEYYSATLKNVMLEKGDSDPLYRRSEQPDSSTSFANSLLINEEVIGIITLEDVMEEILQEDILDETDEYVDVHKNITIKLQHPRRGASRSSRRTSTSSRVHNFSPTSIAPISPSNQS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0830 470 ProSiteProfiles CNNM transmembrane domain profile. 12 195 IPR002550 -
Lal9g0830 470 Pfam Cyclin M transmembrane N-terminal domain 27 184 IPR002550 -
Lal9g0830 470 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 6 459 IPR045095 GO:0010960
Lal9g0830 470 PANTHER CBS DOMAIN PROTEIN 6 459 - -
Lal9g0830 470 CDD CBS_pair_CorC_HlyC_assoc 209 310 IPR044751 -
Lal9g0830 470 Gene3D - 377 418 IPR046342 -
Lal9g0830 470 MobiDBLite consensus disorder prediction 434 470 - -
Lal9g0830 470 Gene3D - 195 329 IPR046342 -
Lal9g0830 470 MobiDBLite consensus disorder prediction 443 470 - -
Lal9g0830 470 SUPERFAMILY CBS-domain pair 198 412 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0830 Lal-Chr9 6042564 6046211 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0830 K16302 - gmx:100798424 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0830 9 6042564 6046211 Lal9g0830 9 6042564 6046211 ECH