Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0826 ATGAGTGTGCTCCTTATGAAGTTATTCCATTATCTTCTTAATATTCAGAAAATTTCTTTTGGGGGTGATTGTGAGGGTATAGCAACGAACATTCGAGACTTAACCTTTACCCGCCAAGACAATAGGGAACTTTCTGGATACAATATTCAAAACCAAAACGACGCCGTCTCACTCCCACGCCATTCTAATTTCATCGAAAACCCAGAGAAACGTAGAAGAATCCAGAACGTACTTGTTTTTTCCACCACCCTTCTTTTCCTCTCTATATATAAGCCTCACTCATTCTCATTCATCTTCCATAGAAAAAATAATCACTTTTCTCTCTCTATAACTTTCAACAACAATAATTGCTTTTCGTTATCAATGGCAGACGCAGAAACCTTCGCTTTCCAAGCTGAAATCAACCAACTTCTGAGTCTCATAATCAATACATTCTACTCCAACAAGGAGATCTTTCTTCGTGAACTTATCAGCAATTCTTCTGATGCTTTGGATAAGATTCGATTTGAAAGCTTAACTGATAAGAGCAAGCTCGATGGTCAGCCAGAACTTTTCATTCGCCTTGTTCCAGATAAGGCTAACAAAACCTTATCCATCATTGATAGTGGCATTGGCATGACCAAAGCAGATTTGGTGAACAATTTGGGTACAATAGCGAGATCGGGGACGAAGGAATTCATGGAGGCATTGCAGGCAGGTGCTGATGTGAGCATGATTGGGCAATTTGGAGTTGGATTTTACTCAGCATACCTTGTTGCTGAGAAGGTGATTGTGACTACTAAGCACAATGATGATGAACAATATATCTGGGAATCACAGGCTGGTGGGTCCTTTACTGTGACTAGGGACACTGATGGAGAACAACTTGGACGAGGAACCAAGATTACCCTTTTCCTCAAGGAGGATCAGTTGGAATACTTGGAGGAGAGAAGGATTAAGGATCTTGTTAAGAAACACTCTGAATTTATTAGCTATCCAATTTACTTGTGGACTGAGAAGACAACTGAGAAAGAAATCAGTGATGATGAAGATGACGAGCCGAAGAAGGAGGAAGAAGGTGCAGTTGAGGAAATTGATGAAGACAAGGACAAAGATTCAAAGAAGAAGAAGAAGATTAAAGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAACCAATTTGGCTCCGAAAGCCAGAAGAAATAACCAAGGATGAGTATGCTTCATTTTACAAGAGTCTCACCAATGATTGGGAAGACCATTTGGCAGTGAAGCATTTCTCTGTAGAGGGTCAGCTTGAATTCAAGGCAATTCTATTTGTTCCCAAGAGGGCGCCTTTCGATTTGTTCGACACAAGGAAGAAGATGAACAACATTAAGCTTTATGTTAGGAGGGTTTTCATCATGGATAACTGCGAGGAGCTAATACCCGAGTGGCTTGGATTTGTGAAAGGCGTTGTTGACTCTGATGACTTGCCTCTCAACATTTCCCGTGAGATGTTGCAGCAGAACAAGATATTGAAGGTGATTAGGAAGAACCTTGTGAAGAAGTGCATCGAGATGTTCAATGAGATTGCAGAGAATAAGGAAGATTATAACAAGTTCTATGATGCTTTCTCCAAGAATTTGAAGCTGGGTATTCATGAGGATAGCCAGAACAGGGCCAAATTATCTGACTTGCTTAGATATCACTCTACAAAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATGTTACCAGAATGAAGGAGGGTCAGAAAGACATATACTACATCACTGGAGAGAGCAAGAAGGCTGTGGAGAATTCTCCATTCTTGGAGAGGCTCAAGAAGAAGGGGTATGAGGTTCTGTTCATGGTGGATGCCATTGATGAGTATGCTGTTGGACAACTCAAGGAGTATGATGGAAAGAAATTGGTTTCAGCTACAAAGGAGGGACTGAAATTGGATGATGAAACAGAGGAAGAGAAAAAGAAAAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTCTGCAAGACCATCAAGGACATTCTGGGAGACAAAGTTGAGAAGGTAGTTGTGTCTGATAGAATTGTTGATTCACCCTGCTGTTTAGTGACTGGTGAGTACGGTTGGACCGCGAACATGGAGAGGATCATGAAGGCTCAGGCATTGAGGGATAGCAGCATGAGTGGCTACATGTCCAGCAAGAAGACCATGGAAATCAACCCAGACAATGGTATAATGGAGGAGTTAAGGAAGAGGGCTGAAGCTGATAAGAATGATAAGTCAGTGAAGGACCTTGTATTGCTTCTGTTTGAGACAGCACTATTGACTTCTGGTTTCAGCCTTGATGATCCTAACACATTTGCTGCAAGGATCCATAGGATGTTGAAGCTTGGTCTTAGCATTGATGAGGAAGAGACAGTTGGTGATGATGTTGATATGCCTCCACTGGAAGAGGATGCTGCAGAGGAGAGCAAGATGGAGGAAGTGGATTAG 2463 0.4174 MSVLLMKLFHYLLNIQKISFGGDCEGIATNIRDLTFTRQDNRELSGYNIQNQNDAVSLPRHSNFIENPEKRRRIQNVLVFSTTLLFLSIYKPHSFSFIFHRKNNHFSLSITFNNNNCFSLSMADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKANKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDTDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDDEPKKEEEGAVEEIDEDKDKDSKKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYDAFSKNLKLGIHEDSQNRAKLSDLLRYHSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDETEEEKKKKEEKKKSFEDLCKTIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEETVGDDVDMPPLEEDAAEESKMEEVD 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0826 820 Coils Coil 644 664 - -
Lal9g0826 820 Gene3D - 383 551 - -
Lal9g0826 820 MobiDBLite consensus disorder prediction 795 820 - -
Lal9g0826 820 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 120 819 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal9g0826 820 SMART HKATPase_4 148 303 IPR003594 -
Lal9g0826 820 CDD HATPase_Hsp90-like 135 323 - -
Lal9g0826 820 PIRSF HSP90_HTPG 99 820 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal9g0826 820 MobiDBLite consensus disorder prediction 338 359 - -
Lal9g0826 820 SUPERFAMILY Ribosomal protein S5 domain 2-like 384 639 IPR020568 -
Lal9g0826 820 Gene3D - 123 349 IPR036890 -
Lal9g0826 820 Pfam Hsp90 protein 305 815 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal9g0826 820 Hamap Chaperone protein HtpG [htpG]. 123 786 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal9g0826 820 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 148 302 IPR003594 -
Lal9g0826 820 Gene3D - 552 638 - -
Lal9g0826 820 Gene3D - 639 790 IPR037196 -
Lal9g0826 820 MobiDBLite consensus disorder prediction 336 369 - -
Lal9g0826 820 ProSitePatterns Heat shock hsp90 proteins family signature. 146 155 IPR019805 GO:0005524|GO:0006457|GO:0051082
Lal9g0826 820 PANTHER HEAT SHOCK PROTEIN 90-1 120 819 - -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 126 146 IPR020575 -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 147 169 IPR020575 -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 196 213 IPR020575 -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 214 231 IPR020575 -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 239 261 IPR020575 -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 291 308 IPR020575 -
Lal9g0826 820 PRINTS 90kDa heat shock protein signature 309 327 IPR020575 -
Lal9g0826 820 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 126 334 IPR036890 -
Lal9g0826 820 SUPERFAMILY HSP90 C-terminal domain 663 785 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0826 Lal-Chr9 6011392 6016203 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0826 K04079 - gmx:100811234 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0826 9 6011392 6016203 Lal9g0826 9 6011392 6016203 ECH