Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0807 ATGGATTCTAGAGTAGCACAAAGCCATCCACACGTTAATGATGAAGAATACCATCATAATCAACAAGTGTTGCAGCATGGTGAAGAAGAGCACCACCATGAGCATGAGAAGAAATCGGTTCTGAAGAAGGTGAAAGCAAAGGCTAAGAAAATTAAAGACAAAGTCACAAAGCATGGTGGTCATGATCAGTATCACTATGAAGATCAGCATATCCCTGATGATCATGACTTGGATCAGGAAGATGATGAGGATGAAGAAATGGTTCAAGACCCAGAAATACATGGAGCACCAATTTATGACAGTGCTACTGTTAAAGGTGGAACACCAGGGCAAGTTCAAAATTTAAGGAGGCATGGAGCAAATTTTGAAGATTCAACAGTTATGGCTGAACCACCTCATCACAATGCAAGAGTTGTAGTTGTTTCTCCAACAACTGGAATTGGTGAAGGCAGAGTCAATGACCCAGCCAGAACATTTGTTGGAGAGGATATGAGAATGCATGATAAGGTTAATTTGGTGAGACCAATGGGATTGGAGGAAGATCCTCATGCACCAAGAAGTACACCTGTGGCACATGCTCCTGCAAATTATCAAACCAAAGTCACTGATCCAACTGGGGCAGGTGGTGCAGAAATTGACATTACCCCAGTTCAGAGTTCTCTTTCCAACATGGTTCTCCACAATGAGCCAAAACCTAATCTAGAACCAAAAACCCTTCCAACTATTACTGAAACTCAGCACATTTTAATAACTGAAAGCCACCACCAATTTGTGCCAGAGCTTTCTACTGCAACTAAAACTCAATACCCTTCTGCTCAAACACATGACCACAACATGCCACAACTGTCTTGTGAAATTAAAACTCAGTATCCAAGAAGCCGTGATCAGCTTATGCCAGACTTGCATACTTCAAACAAAACTCATTACCCTTCTACTACTACTCATGACCAAAACCTACCAGGACTATCAAGTGCAACTCAATCTCATTACCCTTCTGCTAGAAGCCATGATCAGTTTATGACAGACTTGCATGGTTCAACCAAAAGTCACTATCCTTCTGCTATAAGCCATGACCAAAACCTGCCAGGGCTATCAAGTGCAACTAAAACTCATTACCCTTCTGATGGGAGCCATGATCAGTTTAAGCCAGACTTGCTTGGTTCAACCAAAAATCATTATCCTTCTGCTGTGAGCCATGACCAAAACATGCCAGATTTGTCAAGTTCAAATAAAACTCATTCTTCTGTAAGCCATGACCAAAACCTACCACAACTATCAAGTGAAGCTAAAACTCATTACCCTTCTATAAGCCTTGACCAAAACCTGCCACAACTATCAAGTGATGCTAAAGCTCATTACCCTTCTATAAACCATGACCAAAACCTGCCACATCTATCAAGTGGAGCTAAAACTCATTACCCTTCTGCTGGAAGCCATGATTCAGGGTTGTTTTCTACCGAACCAAAAAACCAGTACTCTTCTGCTAAAAGCCATCATGACCAGGACTTGTCACACACATCTGGTGCAACAAAAACTCAATACCCTTCTGTTGGAAGCCATGATCAGTTTGTACCAGATTGGCCTACTCAAACTAAACCACACTACCATTCTTCTGGAAATCAGGCTCAGTTTATGACTGAGCCAATACCCATAAGTACCAATGCATACTCACAAGCTCCTAAACCAACCACCACTAGATTTCAAGAACAACCTCAACAACCACACTATGAATCAATGGAGAAACCATCAAATGAAAGCAGTTACACGGACAAAATCTCTTCCACCACATCTGCAATAGCTGATAAAGCTGTTACAGCTAAAGATGCGGTCGCGTCCAAGCTTGGTTATGGAGAGAAAGGTGATGACAAAGAAACAAGGTTTCATGCAGACAACAGAACTGGTGAAAAAACACCAAACCAAAGCAGTTACACTGAGAAAATTTCATCTGCAACTTCTGCTATTGCTGATAAAGCCGCATCTGCTAAAAACACTGTAGCTTCAAAGCTTGGTTATGGAGAGAAAGGTGATAGCAGAGACAACAAAGTAACAACAACAACAAAACACCAAGAGGAAAAAAGGGATAATGCTGATAACAGTACTAGTAATACAGCTGCAGAGTATGGGAAGAACATTGCTCTTTCTCTGTCACAGAAACTAGCTCCCGTGTATGGAAAGGTTGCTGGGGTAGGAAGTGCAGTGAAGTCTAAACTCCCTGGAACTGAAACAGAGAGTGTGGGTGTGGAACAAGATAGAGGAGTTTCAGTGAAAGACTATTTGGTTGATAAGCTAAGGCCTAGTGAAGAAGATAAGGCACTTTCTGAAGTGATTTCAGAAAGTTTGCATAAGAAGGAAGAAGAACCAAGAGAGGTTAGGGATGTGAAGAATGTGATATCTGATGCTGTGAACAAGAAAGAAGAAGAGGCTGAGATAAGAGAAAGACATAGACCCTTGGGGAAGGTGACTGAGTCAGAAGAAGTGAAAATGAGATTGGGCACTGATGAGAAAGCAGAAAGAAGATATGAAGATGTTTATGTTAATAGTCCTGGAACTGGTGTGGTTGATAAGCTGAAGAATGTGGTTGGATCCTGGTTTGGTGCTAGTAACCCAGAGGAGAATCAATCTTCACAAGTTGCAGGAGGTGAAAATTTGTCTAAGAATTCTGGTTCAGATGTTGGTGAAAGAAGACTCCAGGAGTCATCTCATTGA 2706 0.4154 MDSRVAQSHPHVNDEEYHHNQQVLQHGEEEHHHEHEKKSVLKKVKAKAKKIKDKVTKHGGHDQYHYEDQHIPDDHDLDQEDDEDEEMVQDPEIHGAPIYDSATVKGGTPGQVQNLRRHGANFEDSTVMAEPPHHNARVVVVSPTTGIGEGRVNDPARTFVGEDMRMHDKVNLVRPMGLEEDPHAPRSTPVAHAPANYQTKVTDPTGAGGAEIDITPVQSSLSNMVLHNEPKPNLEPKTLPTITETQHILITESHHQFVPELSTATKTQYPSAQTHDHNMPQLSCEIKTQYPRSRDQLMPDLHTSNKTHYPSTTTHDQNLPGLSSATQSHYPSARSHDQFMTDLHGSTKSHYPSAISHDQNLPGLSSATKTHYPSDGSHDQFKPDLLGSTKNHYPSAVSHDQNMPDLSSSNKTHSSVSHDQNLPQLSSEAKTHYPSISLDQNLPQLSSDAKAHYPSINHDQNLPHLSSGAKTHYPSAGSHDSGLFSTEPKNQYSSAKSHHDQDLSHTSGATKTQYPSVGSHDQFVPDWPTQTKPHYHSSGNQAQFMTEPIPISTNAYSQAPKPTTTRFQEQPQQPHYESMEKPSNESSYTDKISSTTSAIADKAVTAKDAVASKLGYGEKGDDKETRFHADNRTGEKTPNQSSYTEKISSATSAIADKAASAKNTVASKLGYGEKGDSRDNKVTTTTKHQEEKRDNADNSTSNTAAEYGKNIALSLSQKLAPVYGKVAGVGSAVKSKLPGTETESVGVEQDRGVSVKDYLVDKLRPSEEDKALSEVISESLHKKEEEPREVRDVKNVISDAVNKKEEEAEIRERHRPLGKVTESEEVKMRLGTDEKAERRYEDVYVNSPGTGVVDKLKNVVGSWFGASNPEENQSSQVAGGENLSKNSGSDVGERRLQESSH 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0807 901 MobiDBLite consensus disorder prediction 296 427 - -
Lal9g0807 901 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 474 625 - -
Lal9g0807 901 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 626 898 - -
Lal9g0807 901 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 294 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 55 73 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 391 427 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 1 37 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 863 901 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 452 492 - -
Lal9g0807 901 Pfam CAP160 repeat 647 672 IPR012418 -
Lal9g0807 901 Pfam CAP160 repeat 592 617 IPR012418 -
Lal9g0807 901 MobiDBLite consensus disorder prediction 616 647 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 804 838 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 669 703 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 506 540 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 1 88 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 38 54 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 672 697 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 865 890 - -
Lal9g0807 901 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 626 898 IPR037491 GO:0009737
Lal9g0807 901 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 294 IPR037491 GO:0009737
Lal9g0807 901 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 474 625 IPR037491 GO:0009737
Lal9g0807 901 MobiDBLite consensus disorder prediction 452 540 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 768 791 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 298 374 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 553 593 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 616 633 - -
Lal9g0807 901 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0807 Lal-Chr9 5833427 5837323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0807 - - aprc:113866664 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0807 9 5833427 5837323 Lal9g0807 9 5833427 5837323 ECH