Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0563 ATGCCTAGAGTGGTTGTTCTTTTTCTTATGCTCTTATCTCTCTCACCAGGATGGATTCTGATTATGGTTAATGGACAAAGAACTTGGTGTGTAGCTAAGCCTTCAACAGAGAAGGCTACCCTTTTGGTTAACATCAACTATGCCTGCTCTCAAGTTGATTGCCAGATCCTGCAGAAAGGTTGCCCCTGCTTTGCCCCGGACAATCTCTATAACCACGCCTCCGTAGCGATGAATCTCTATTATCAGTCTCATGGAAGAAACCACTGGAATTGTGATTTCAAGGGCTCTGCCATTGTTGTAGTGACTGATCCTAGTTATGGTAGCTGCATTTACCCCTAG 339 0.4454 MPRVVVLFLMLLSLSPGWILIMVNGQRTWCVAKPSTEKATLLVNINYACSQVDCQILQKGCPCFAPDNLYNHASVAMNLYYQSHGRNHWNCDFKGSAIVVVTDPSYGSCIYP 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0563 112 SMART X8_cls 28 111 IPR012946 -
Lal9g0563 112 Pfam X8 domain 28 97 IPR012946 -
Lal9g0563 112 PANTHER MAJOR POLLEN ALLERGEN OLE E 10-LIKE 5 112 - -
Lal9g0563 112 Gene3D - 22 110 - -
Lal9g0563 112 PANTHER BETA-1,3 GLUCANASE 5 112 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0563 Lal-Chr9 3814490 3818659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0563 29 111 Glycoside Hydrolase AT3G55430 45.238 8.48e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0563 - - gmx:100784427 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0563 9 3814490 3818659 Lal9g0563 9 3814490 3818659 ECH